KEGG   Podospora anserina: PODANSg5608
Entry
PODANSg5608       CDS       T01048                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pan  Podospora anserina
Pathway
pan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PODANSg5608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pan03041]
    PODANSg5608
Spliceosome [BR:pan03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    PODANSg5608
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st PRP4 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_IFT140_1st WDR54 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_RIG_1st Tricorn_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Nbas_N WD40_RFWD3
Other DBs
NCBI-GeneID: 6192922
NCBI-ProteinID: XP_001908573
UniProt: B2AXX2
LinkDB
Position
1
AA seq 546 aa
MTRNQPKIQTKSIPTAVMMHPSRRAYVEEADTEDRGSGGIDIDAIPIDRDYDIPGAGAGI
APERASAIISQFERKRFAATIAVPTDDGRVRAKLRELGEPITLFGEGPVDRRDRLRELLT
EQAQQATGQESADVEMQDAGNDEEAEEQEEEFYSRGTQELLDARIEIAKFTIPRAKRRVE
FQKKEATIPLRTHVKFRKEIKERLQTFELQASQTAGDRHVSMTRFSPDGQMIATGNWGGQ
VKLIDIPTLEHRKTLRGHTNKISGLAWRPGATLPEANISEDTVNLASGGAEGQVHLWSLN
QDTPLSTLSGHSQRVCRVEFHPSGKYLASASEDTSWRLWDVETTTELLLQEGHSRGVYAV
SFNTDGSLLASAGLDSIGRIWDLRSGRTVMILDGHLDGHIKPIYGLDWSPDGHRVLTASA
DGWIKCWDVRKVQRTGGIGAHTSAVSDVRWFKGMDEPVDGKPPGEDDKGNQLPKKSGTFL
VSSGFDHKVNIFSADDWALAQSLSGHTGPVASVDVSRDGKWIISGGHDRTVKLWGRNDAT
GLYGDF
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgaccaggaaccagccaaaaatacaaacaaaatcaatacccaccgcagtcatgatgcac
ccatcacgtagggcgtatgttgaggaggctgacactgaggaccgaggaagtggaggcatt
gacatagatgccattccaatcgaccgcgactatgacatccccggagccggcgcaggcatt
gcgcccgagagagcatcagccatcatctcacaattcgagcgcaagcgattcgccgccact
atcgcggtcccaaccgacgatggacgtgtccgcgccaaacttcgagagctaggcgagcct
atcacgctgttcggcgaaggaccggtcgatcgacgcgacaggttacgagagcttcttacc
gagcaggcgcagcaggcgacaggccaggagagcgcagatgtggagatgcaggatgctggc
aacgacgaggaagcggaagagcaagaggaagagttttactctcgaggaacacaggagctt
ctcgatgcccgaatagaaatcgccaagtttacgatcccccgagcgaaacggcgcgtcgag
tttcagaagaaggaggctacgattcctctccgtacccatgtcaagtttaggaaggagatc
aaggagcggcttcagacgtttgaattgcaagccagtcagactgcgggagatcgtcatgtg
agcatgacgaggttttcgccagatggacagatgattgcgactggaaattggggcggtcaa
gtcaagcttatcgatataccgactttggagcatcgcaagacgctgcgaggacataccaac
aagatcagcggtttggcctggaggcctggtgctacccttcccgaggccaacatctcggag
gacacggtcaaccttgcttcgggtggtgcagagggccaggttcatctttggtcgctaaac
caagatacaccgctatcgacgctctctgggcactcgcaaagagtatgccgtgtcgagttt
cacccttctggaaaatacctcgcatctgcgtctgaggacacgtcgtggaggctgtgggat
gtcgaaacaacaaccgaactgcttcttcaagagggacactcgcggggagtgtacgccgta
agcttcaacaccgacgggtccttgctggccagtgcaggtctggacagtattggaagaatc
tgggatttgcggtcgggacggacagtcatgattctggacgggcatctggatggccacatc
aagccgatctacgggctggactggagtccggacgggcaccgagtcctcacggcctcggca
gatggatggatcaaatgctgggacgtgagaaaagtgcagaggacaggcggaattggtgcg
cacacaagcgcggtatcagatgtcagatggttcaaggggatggatgagcccgttgacggg
aagccaccaggcgaggacgacaagggaaaccagttgccaaagaagtctgggacgtttttg
gtgtcgtctgggtttgaccacaaggtcaacattttctcggctgatgactgggctcttgct
cagtcgctgagcggccatactggcccagtagcgagtgtcgatgtaagccgggacggcaag
tggatcatcagcggtggacatgatcggactgtcaagttatggggtcgtaatgatgcaacc
ggtctgtatggtgacttttag

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