Podospora anserina: PODANSg5608
Help
Entry
PODANSg5608 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pan
Podospora anserina
Pathway
pan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PODANSg5608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pan03041
]
PODANSg5608
Spliceosome [BR:
pan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PODANSg5608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR54
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Tricorn_2nd
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Nbas_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
6192922
NCBI-ProteinID:
XP_001908573
UniProt:
B2AXX2
LinkDB
All DBs
Position
1
AA seq
546 aa
AA seq
DB search
MTRNQPKIQTKSIPTAVMMHPSRRAYVEEADTEDRGSGGIDIDAIPIDRDYDIPGAGAGI
APERASAIISQFERKRFAATIAVPTDDGRVRAKLRELGEPITLFGEGPVDRRDRLRELLT
EQAQQATGQESADVEMQDAGNDEEAEEQEEEFYSRGTQELLDARIEIAKFTIPRAKRRVE
FQKKEATIPLRTHVKFRKEIKERLQTFELQASQTAGDRHVSMTRFSPDGQMIATGNWGGQ
VKLIDIPTLEHRKTLRGHTNKISGLAWRPGATLPEANISEDTVNLASGGAEGQVHLWSLN
QDTPLSTLSGHSQRVCRVEFHPSGKYLASASEDTSWRLWDVETTTELLLQEGHSRGVYAV
SFNTDGSLLASAGLDSIGRIWDLRSGRTVMILDGHLDGHIKPIYGLDWSPDGHRVLTASA
DGWIKCWDVRKVQRTGGIGAHTSAVSDVRWFKGMDEPVDGKPPGEDDKGNQLPKKSGTFL
VSSGFDHKVNIFSADDWALAQSLSGHTGPVASVDVSRDGKWIISGGHDRTVKLWGRNDAT
GLYGDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggaaccagccaaaaatacaaacaaaatcaatacccaccgcagtcatgatgcac
ccatcacgtagggcgtatgttgaggaggctgacactgaggaccgaggaagtggaggcatt
gacatagatgccattccaatcgaccgcgactatgacatccccggagccggcgcaggcatt
gcgcccgagagagcatcagccatcatctcacaattcgagcgcaagcgattcgccgccact
atcgcggtcccaaccgacgatggacgtgtccgcgccaaacttcgagagctaggcgagcct
atcacgctgttcggcgaaggaccggtcgatcgacgcgacaggttacgagagcttcttacc
gagcaggcgcagcaggcgacaggccaggagagcgcagatgtggagatgcaggatgctggc
aacgacgaggaagcggaagagcaagaggaagagttttactctcgaggaacacaggagctt
ctcgatgcccgaatagaaatcgccaagtttacgatcccccgagcgaaacggcgcgtcgag
tttcagaagaaggaggctacgattcctctccgtacccatgtcaagtttaggaaggagatc
aaggagcggcttcagacgtttgaattgcaagccagtcagactgcgggagatcgtcatgtg
agcatgacgaggttttcgccagatggacagatgattgcgactggaaattggggcggtcaa
gtcaagcttatcgatataccgactttggagcatcgcaagacgctgcgaggacataccaac
aagatcagcggtttggcctggaggcctggtgctacccttcccgaggccaacatctcggag
gacacggtcaaccttgcttcgggtggtgcagagggccaggttcatctttggtcgctaaac
caagatacaccgctatcgacgctctctgggcactcgcaaagagtatgccgtgtcgagttt
cacccttctggaaaatacctcgcatctgcgtctgaggacacgtcgtggaggctgtgggat
gtcgaaacaacaaccgaactgcttcttcaagagggacactcgcggggagtgtacgccgta
agcttcaacaccgacgggtccttgctggccagtgcaggtctggacagtattggaagaatc
tgggatttgcggtcgggacggacagtcatgattctggacgggcatctggatggccacatc
aagccgatctacgggctggactggagtccggacgggcaccgagtcctcacggcctcggca
gatggatggatcaaatgctgggacgtgagaaaagtgcagaggacaggcggaattggtgcg
cacacaagcgcggtatcagatgtcagatggttcaaggggatggatgagcccgttgacggg
aagccaccaggcgaggacgacaagggaaaccagttgccaaagaagtctgggacgtttttg
gtgtcgtctgggtttgaccacaaggtcaacattttctcggctgatgactgggctcttgct
cagtcgctgagcggccatactggcccagtagcgagtgtcgatgtaagccgggacggcaag
tggatcatcagcggtggacatgatcggactgtcaagttatggggtcgtaatgatgcaacc
ggtctgtatggtgacttttag
DBGET
integrated database retrieval system