KEGG   Podospora anserina: PODANSg5898
Entry
PODANSg5898       CDS       T01048                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
pan  Podospora anserina
Pathway
pan03018  RNA degradation
pan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PODANSg5898
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PODANSg5898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pan03019]
    PODANSg5898
   03041 Spliceosome [BR:pan03041]
    PODANSg5898
Messenger RNA biogenesis [BR:pan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PODANSg5898
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PODANSg5898
Spliceosome [BR:pan03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    PODANSg5898
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 6193324
NCBI-ProteinID: XP_001908863
UniProt: B2AYR2
LinkDB
Position
1
AA seq 144 aa
KPSFSPTPQHHPSSHSQPPNPQQNVNQQLHLQSAPLPSPPPILPFRPPILTLSPSEKVCI
ITTDGRTLVGTLAAYDNTTNLVLQNTIERIIRTPDDAEPSAQVPLGLYLIRGENVCTIGL
VDEALDDSINWAEVKGAVIGTTKH
NT seq 435 nt   +upstreamnt  +downstreamnt
aagccctccttttcaccaaccccacaacaccacccctcctctcactctcaacctcccaac
ccacaacaaaatgtcaatcaacagctacatctccagtccgcccccctcccctcccccccc
cccatcctcccctttcgtccccccatactaaccttgtccccttcagaaaaagtctgcatc
atcaccaccgacggcagaaccctggtcggcaccctcgccgcgtacgacaacacaaccaac
ctcgtcctccaaaacaccatcgagcgtatcatccgcacccccgatgacgccgagccctcg
gcccaggttcccctgggcctctacctcatccgcggcgagaacgtctgcacgatcgggctc
gtggacgaggcgctagacgacagcatcaactgggccgaggtcaagggggctgtgattggg
actacgaagcattaa

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