Podospora anserina: PODANSg5898
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Entry
PODANSg5898 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pan
Podospora anserina
Pathway
pan03018
RNA degradation
pan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PODANSg5898
09123 Folding, sorting and degradation
03018 RNA degradation
PODANSg5898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg5898
03041 Spliceosome [BR:
pan03041
]
PODANSg5898
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PODANSg5898
mRNA degradation factors
5'-3' decay
Lsm complex
PODANSg5898
Spliceosome [BR:
pan03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PODANSg5898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
6193324
NCBI-ProteinID:
XP_001908863
UniProt:
B2AYR2
LinkDB
All DBs
Position
1
AA seq
144 aa
AA seq
DB search
KPSFSPTPQHHPSSHSQPPNPQQNVNQQLHLQSAPLPSPPPILPFRPPILTLSPSEKVCI
ITTDGRTLVGTLAAYDNTTNLVLQNTIERIIRTPDDAEPSAQVPLGLYLIRGENVCTIGL
VDEALDDSINWAEVKGAVIGTTKH
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
aagccctccttttcaccaaccccacaacaccacccctcctctcactctcaacctcccaac
ccacaacaaaatgtcaatcaacagctacatctccagtccgcccccctcccctcccccccc
cccatcctcccctttcgtccccccatactaaccttgtccccttcagaaaaagtctgcatc
atcaccaccgacggcagaaccctggtcggcaccctcgccgcgtacgacaacacaaccaac
ctcgtcctccaaaacaccatcgagcgtatcatccgcacccccgatgacgccgagccctcg
gcccaggttcccctgggcctctacctcatccgcggcgagaacgtctgcacgatcgggctc
gtggacgaggcgctagacgacagcatcaactgggccgaggtcaagggggctgtgattggg
actacgaagcattaa
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