Podospora anserina: PODANSg6581
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Entry
PODANSg6581 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pan
Podospora anserina
Pathway
pan03022
Basal transcription factors
pan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PODANSg6581
09124 Replication and repair
03420 Nucleotide excision repair
PODANSg6581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pan03021
]
PODANSg6581
03400 DNA repair and recombination proteins [BR:
pan03400
]
PODANSg6581
Transcription machinery [BR:
pan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PODANSg6581
DNA repair and recombination proteins [BR:
pan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PODANSg6581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Speriolin_N
HCMV_UL124
Motif
Other DBs
NCBI-GeneID:
6193589
NCBI-ProteinID:
XP_001909545
UniProt:
B2B0V3
LinkDB
All DBs
Position
3
AA seq
396 aa
AA seq
DB search
MSAQDAVDASEHYEVSKLEDVPSLTTIIIDTNPRAWAALGDVLPLSKAIANIQIFINAHL
ALSNTNQIAILAAHTNRAVWLYPTPPKPPSEDVEMRDAGKTDTFLNTANKFPQYAQIEHA
LVTSLRELIGSTIPPDLNETTTQMSGALTLALAHMNKTALAYSASQALSNSTAGTTAPGT
TASTGLVGFHGRILVISVSDSAASQYIPTMNAVFAASMSRIAIDTLALRGSATFLEQASF
ITQGTFIQAADPQGILQYLMFGFGVGSASSGLSAAQNDGSGPLMGKSKTGKQREGDELRK
PVGECLFTPAADSVDFRAACFCHRNVVDTGFVCSICLSIFCEPPPGDECLTCGNKLAVGD
YGMIKTPDGLNVEPANARLAPSPSAKRKRKLEANGE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccaagatgcggtggacgcctccgagcactacgaggtctccaagctcgaagat
gtgccctcgttgaccaccatcatcatcgatacaaacccacgcgcttgggcagcactgggg
gacgttcttccactctcaaaggccattgccaatatccagatattcatcaacgcccaccta
gcgttaagcaacacaaaccagatcgccattttagccgcacacacgaaccgagctgtatgg
ctgtatccaacgcccccaaaaccaccatcagaggatgttgagatgcgagatgccggcaag
acggataccttcttaaacacagcgaataaattcccacaatacgcccaaatcgaacacgcc
ctcgtaacctccctccgtgagctcatcgggagcacgataccaccggacctcaacgagacc
acaactcaaatgtcaggcgccttaacactcgccttagcccatatgaacaagacggcgctt
gcctatagtgcgagccaggcactctccaactctactgcaggaaccactgccccgggcaca
accgcaagcaccggtttggtcggttttcacggccgtatcctcgtcatctccgtctccgac
tccgccgcctcccaatacatccccaccatgaacgccgtcttcgcagcctccatgtcccga
atcgccatcgatacccttgctctccgaggcagtgccaccttcctcgagcaagcctctttc
ataacccaaggcacatttattcaagccgccgaccctcaaggcatcttacagtacctcatg
ttcggttttggagtgggtagcgcatcttccgggctttcagcagcacagaatgacggctcc
gggccactgatgggcaaatcaaaaacaggcaaacaaagagagggagatgagctgaggaag
ccggtgggagaatgcctgtttacgccggcggcggactcggtagatttcagggccgcgtgt
ttctgccacaggaacgtagtggacacggggtttgtgtgtagtatctgcttgagcattttt
tgtgagccaccgcctggggacgagtgtttgacctgtgggaataaattggcggtgggggat
tatgggatgatcaagacaccggatggattgaacgtggagccggctaatgcgagattggcg
ccttctccgagtgctaagagaaagaggaagttggaggccaatggggaataa
DBGET
integrated database retrieval system
