KEGG   Podospora anserina: PODANSg6622
Entry
PODANSg6622       CDS       T01048                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
pan  Podospora anserina
Pathway
pan03030  DNA replication
pan03410  Base excision repair
pan03420  Nucleotide excision repair
pan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PODANSg6622
   03410 Base excision repair
    PODANSg6622
   03420 Nucleotide excision repair
    PODANSg6622
   03430 Mismatch repair
    PODANSg6622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pan03032]
    PODANSg6622
   03036 Chromosome and associated proteins [BR:pan03036]
    PODANSg6622
   03400 DNA repair and recombination proteins [BR:pan03400]
    PODANSg6622
DNA replication proteins [BR:pan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PODANSg6622
  DNA Replication Termination Factors
   ELG1-RFC complex
    PODANSg6622
Chromosome and associated proteins [BR:pan03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PODANSg6622
DNA repair and recombination proteins [BR:pan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PODANSg6622
  Check point factors
   HRAD17(Rad24)-RFC complex
    PODANSg6622
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA AAA_16 Rep_fac_C AAA_24 Rad17 ABC_tran
Other DBs
NCBI-GeneID: 6193966
NCBI-ProteinID: XP_001909586
UniProt: B2B0Z4
LinkDB
Position
3
AA seq 352 aa
MALIVDKHRPRSLDALTYHDELSDRLRSLAQSGDFPHLLFYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTSSNRKLEFNIVASVYHLEITPSDVGNYDRVVVQDLLKEVAQTQQ
VDQSARQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILVGESTAGIIAPIRSRCL
LVRVARPTVGEVEGVLRGSCEREGWEVREGLVGRVARESGRNLRRALLMLEGVYAQNEKV
TDDTPIPPPDWEGLIEQIAQEIMAEHTSARILQVRSKLYDLLTHCIPPTTILKTLTFKLM
PLIDDDLKPEVIKWSAFYEHRIKTGTKVIFHLEAFVAKFMRILEMYLMSMDM
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggcgctcattgtcgacaagcaccggcccagaagtctagatgctttgacatatcatgat
gaattgtctgatcgactccgttctttggctcaatcaggcgacttcccccacctcctcttc
tacggcccttccggagcaggcaaaaagactcgcatcgtcgcgacgctcaaggagctgtac
ggccccggtgtggaaaagatcaagattgacgcgcgggtcttccaaacgagctcgaacagg
aagctcgagtttaacatcgtcgcgagcgtgtaccacctcgagatcacgccgtcggacgtg
gggaattatgacagggtggtggttcaggacttgctgaaggaggtggcgcagacgcagcag
gttgatcagagcgcgaggcaaaggttcaaggttgtggtgattaatgaggcggatcacttg
acgagggacgcgcaggctgcgctgaggaggacgatggagaagtatagtccgaatttgagg
ctgatcttggttggggagagcacggcggggattattgctccgattaggagtcggtgtttg
cttgttagggttgcgaggccgacggtgggggaggtggaaggggtgttgagggggagttgt
gagagggaggggtgggaggtgagggaggggttggtggggagggttgcgagggagagcggg
aggaatttgaggagggcgttgttgatgttggagggggtttatgcgcagaatgagaaagtg
acggacgacacaccgatcccgcccccggattgggagggactgattgagcagattgcgcag
gagatcatggctgagcatacctccgcgaggatcctgcaggtgaggagcaagctttatgac
ttgctcacgcactgcatcccgccgacgaccatcttgaagacgttgacgtttaagctgatg
ccgctgattgatgatgatttgaagccggaggtgatcaagtggagtgcgttttatgagcac
aggataaagacggggacaaaggtgatttttcacttggaggcgtttgtggccaagtttatg
aggatattggagatgtatttgatgagtatggatatgtag

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