KEGG   Podospora anserina: PODANSg6703
Entry
PODANSg6703       CDS       T01048                                 
Name
(RefSeq) hypothetical protein
  KO
K12589  exosome complex component RRP42
Organism
pan  Podospora anserina
Pathway
pan03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PODANSg6703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pan03019]
    PODANSg6703
Messenger RNA biogenesis [BR:pan03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     PODANSg6703
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     PODANSg6703
SSDB
Motif
Pfam: RNase_PH RNase_PH_C Cwf_Cwc_15 DUF5304
Other DBs
NCBI-GeneID: 6194069
NCBI-ProteinID: XP_001909667
UniProt: B2B0B9
LinkDB
Position
3
AA seq 376 aa
MASSTNVHLSPAELSYLHTSLSLNPPIRPDGRSPTQYRPLSAETGILPGTNGSARICFAD
GTEAIVGVKAEVEKTRRRWDDDTIFGENQNQEEGEEQDEGEEQGSSDWVELTVEIPGYRD
DDSGTVFLGQMLCEALLADGGFVRRLRINRRFHWKLYLDILLISPPLSYPLPLLSLTTHL
ALLATRLPKLKSEGDEDPFFDDDWAAAPYLYARNPTTKRVTERPPVTLLVMAVGGNVIFD
PSKEELAVADVVLAVSVGDDASSREGGMDVDGRSNNSGRNLKLLSIRTVDPPSRLTPPGV
ANAANSAYGHAQVVSTGANQKMPEARQTESEAVEGVWKPPRGGAKAVVMGALVQKVLVRG
GVADEVLDALEGVDTS
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggcctcctccacaaacgtccacctctcccccgccgagctctcctacctccacacctcc
ctcagtctcaacccccccatccgccccgacggccgctcgccgactcagtaccggcctttg
tccgccgagacggggatcctgcctgggacgaacggctcggctcggatctgcttcgcggac
gggacagaggcgatcgtgggggtgaaggcagaagtggaaaagacgaggcggaggtgggat
gacgatactatctttggggagaatcaaaaccaggaagaaggagaagaacaagatgagggg
gaggagcaggggagtagtgattgggttgagctcacggttgagattccggggtacagggac
gatgatagtgggacggtgtttttggggcagatgctttgtgaggcgctgcttgctgatgga
gggtttgtgaggcggttgaggattaatagacggtttcattggaagctttatcttgatatt
ttgttgatcagcccgccgctttcgtatccgcttccattgctgtcattaacaacccacctc
gcccttctggccacccgcctccctaaactcaagtcagaaggggatgaagacccgtttttt
gacgacgactgggctgcggcgccgtatctgtacgcacgaaacccgaccacgaaaagagtt
accgaacgcccgcctgtgacgttgctggtgatggcggtgggggggaatgtcatttttgat
ccgagcaaggaggagctggcagtggcggatgtggtgctggctgtttcggttggggatgac
gcttcgtcgcgagagggtgggatggatgtggatgggaggagcaacaactcgggcaggaat
ctgaagctattgtctatcaggacggtggacccgccttcgagactgacgccgccgggggtg
gccaacgcggcgaatagcgcttatgggcatgcgcaggttgtgagtacgggtgcgaaccag
aagatgcccgaggcgaggcagacggagagcgaggctgtggagggtgtttggaagccgcct
aggggtggtgccaaggctgttgtgatgggggcgttggtgcaaaaggtgctggttagaggt
ggggtggcggatgaggtgctggatgctttggagggggttgacacttcttga

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