Podospora anserina: PODANSg6703
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Entry
PODANSg6703 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
pan
Podospora anserina
Pathway
pan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PODANSg6703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg6703
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PODANSg6703
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
PODANSg6703
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Cwf_Cwc_15
DUF5304
Motif
Other DBs
NCBI-GeneID:
6194069
NCBI-ProteinID:
XP_001909667
UniProt:
B2B0B9
LinkDB
All DBs
Position
3
AA seq
376 aa
AA seq
DB search
MASSTNVHLSPAELSYLHTSLSLNPPIRPDGRSPTQYRPLSAETGILPGTNGSARICFAD
GTEAIVGVKAEVEKTRRRWDDDTIFGENQNQEEGEEQDEGEEQGSSDWVELTVEIPGYRD
DDSGTVFLGQMLCEALLADGGFVRRLRINRRFHWKLYLDILLISPPLSYPLPLLSLTTHL
ALLATRLPKLKSEGDEDPFFDDDWAAAPYLYARNPTTKRVTERPPVTLLVMAVGGNVIFD
PSKEELAVADVVLAVSVGDDASSREGGMDVDGRSNNSGRNLKLLSIRTVDPPSRLTPPGV
ANAANSAYGHAQVVSTGANQKMPEARQTESEAVEGVWKPPRGGAKAVVMGALVQKVLVRG
GVADEVLDALEGVDTS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccacaaacgtccacctctcccccgccgagctctcctacctccacacctcc
ctcagtctcaacccccccatccgccccgacggccgctcgccgactcagtaccggcctttg
tccgccgagacggggatcctgcctgggacgaacggctcggctcggatctgcttcgcggac
gggacagaggcgatcgtgggggtgaaggcagaagtggaaaagacgaggcggaggtgggat
gacgatactatctttggggagaatcaaaaccaggaagaaggagaagaacaagatgagggg
gaggagcaggggagtagtgattgggttgagctcacggttgagattccggggtacagggac
gatgatagtgggacggtgtttttggggcagatgctttgtgaggcgctgcttgctgatgga
gggtttgtgaggcggttgaggattaatagacggtttcattggaagctttatcttgatatt
ttgttgatcagcccgccgctttcgtatccgcttccattgctgtcattaacaacccacctc
gcccttctggccacccgcctccctaaactcaagtcagaaggggatgaagacccgtttttt
gacgacgactgggctgcggcgccgtatctgtacgcacgaaacccgaccacgaaaagagtt
accgaacgcccgcctgtgacgttgctggtgatggcggtgggggggaatgtcatttttgat
ccgagcaaggaggagctggcagtggcggatgtggtgctggctgtttcggttggggatgac
gcttcgtcgcgagagggtgggatggatgtggatgggaggagcaacaactcgggcaggaat
ctgaagctattgtctatcaggacggtggacccgccttcgagactgacgccgccgggggtg
gccaacgcggcgaatagcgcttatgggcatgcgcaggttgtgagtacgggtgcgaaccag
aagatgcccgaggcgaggcagacggagagcgaggctgtggagggtgtttggaagccgcct
aggggtggtgccaaggctgttgtgatgggggcgttggtgcaaaaggtgctggttagaggt
ggggtggcggatgaggtgctggatgctttggagggggttgacacttcttga
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