KEGG   Podospora anserina: PODANSg6714
Entry
PODANSg6714       CDS       T01048                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
pan  Podospora anserina
Pathway
pan03013  Nucleocytoplasmic transport
pan03015  mRNA surveillance pathway
pan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PODANSg6714
  09122 Translation
   03013 Nucleocytoplasmic transport
    PODANSg6714
   03015 mRNA surveillance pathway
    PODANSg6714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pan03019]
    PODANSg6714
   03041 Spliceosome [BR:pan03041]
    PODANSg6714
Messenger RNA biogenesis [BR:pan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PODANSg6714
    TREX complex
     PODANSg6714
Spliceosome [BR:pan03041]
 Complex C
  Other components
   EJC/TREX
    PODANSg6714
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PODANSg6714
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_PARP14_3 RRM_occluded PHM7_cyt
Other DBs
NCBI-GeneID: 6193733
NCBI-ProteinID: XP_001909678
UniProt: B2B0D0
LinkDB
Position
3
AA seq 248 aa
MGKLDQSLDEILSSQRKNSQGRRRSQRRSVGAKPAAAPAGGIQKTTKPARTASKPASGKG
AGLTGESKIMVSNLPKDVSEAQIKEYFQQAVGQVKKVEISYGPGGVSRGLAHVTFHHADG
ASKAFSTLNGLLIDNRPVKVEVIVASADLIPQPKTLAQRIAQPKAQPKSAATVKHGANGA
KGAPAAGKAGAKKAPRKGRNNRPAKKTAEELDSEMADYFDSGATEPAAANAAAAPAAGGD
AAMEEDVL
NT seq 747 nt   +upstreamnt  +downstreamnt
atgggcaaactcgatcagtctctggatgagatcctctccagccagcgcaagaatagccag
ggccgtcgccgctcccagcgtcgctctgttggcgccaagcctgccgctgcccccgccggt
ggcatccagaaaaccaccaagcctgcccggactgcatccaagcctgcttccggcaaaggt
gccggtttgaccggtgagagcaagatcatggtcagcaacctgcccaaggatgtttccgaa
gcgcagatcaaggaatacttccagcaagctgttggtcaggtcaagaaggtcgagatctcc
tacggccccgggggtgtcagccgtggtctcgcccacgtcactttccaccacgccgatgga
gccagcaaagctttctccactctcaatggtcttctcattgacaatcgcccggtcaaggtc
gaggtgatcgttgcttctgccgatctcattccccagcccaagactctggctcagcgtatt
gcgcagcccaaggctcaacccaagtctgccgccactgtcaagcatggtgccaatggcgcc
aagggtgctcccgctgctggcaaggctggcgccaagaaggctcctcgcaagggccgcaac
aaccgcccagccaagaagactgccgaggagcttgactctgagatggctgactactttgac
agcggtgccactgagcctgccgccgccaacgctgccgcggccccagctgccggtggtgat
gctgcgatggaggaggacgttctttaa

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