Podospora anserina: PODANSg6714
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Entry
PODANSg6714 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
pan
Podospora anserina
Pathway
pan03013
Nucleocytoplasmic transport
pan03015
mRNA surveillance pathway
pan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PODANSg6714
09122 Translation
03013 Nucleocytoplasmic transport
PODANSg6714
03015 mRNA surveillance pathway
PODANSg6714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg6714
03041 Spliceosome [BR:
pan03041
]
PODANSg6714
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PODANSg6714
TREX complex
PODANSg6714
Spliceosome [BR:
pan03041
]
Complex C
Other components
EJC/TREX
PODANSg6714
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PODANSg6714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_PARP14_3
RRM_occluded
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
6193733
NCBI-ProteinID:
XP_001909678
UniProt:
B2B0D0
LinkDB
All DBs
Position
3
AA seq
248 aa
AA seq
DB search
MGKLDQSLDEILSSQRKNSQGRRRSQRRSVGAKPAAAPAGGIQKTTKPARTASKPASGKG
AGLTGESKIMVSNLPKDVSEAQIKEYFQQAVGQVKKVEISYGPGGVSRGLAHVTFHHADG
ASKAFSTLNGLLIDNRPVKVEVIVASADLIPQPKTLAQRIAQPKAQPKSAATVKHGANGA
KGAPAAGKAGAKKAPRKGRNNRPAKKTAEELDSEMADYFDSGATEPAAANAAAAPAAGGD
AAMEEDVL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaactcgatcagtctctggatgagatcctctccagccagcgcaagaatagccag
ggccgtcgccgctcccagcgtcgctctgttggcgccaagcctgccgctgcccccgccggt
ggcatccagaaaaccaccaagcctgcccggactgcatccaagcctgcttccggcaaaggt
gccggtttgaccggtgagagcaagatcatggtcagcaacctgcccaaggatgtttccgaa
gcgcagatcaaggaatacttccagcaagctgttggtcaggtcaagaaggtcgagatctcc
tacggccccgggggtgtcagccgtggtctcgcccacgtcactttccaccacgccgatgga
gccagcaaagctttctccactctcaatggtcttctcattgacaatcgcccggtcaaggtc
gaggtgatcgttgcttctgccgatctcattccccagcccaagactctggctcagcgtatt
gcgcagcccaaggctcaacccaagtctgccgccactgtcaagcatggtgccaatggcgcc
aagggtgctcccgctgctggcaaggctggcgccaagaaggctcctcgcaagggccgcaac
aaccgcccagccaagaagactgccgaggagcttgactctgagatggctgactactttgac
agcggtgccactgagcctgccgccgccaacgctgccgcggccccagctgccggtggtgat
gctgcgatggaggaggacgttctttaa
DBGET
integrated database retrieval system