Podospora anserina: PODANSg7038
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Entry
PODANSg7038 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pan
Podospora anserina
Pathway
pan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PODANSg7038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pan03041
]
PODANSg7038
03009 Ribosome biogenesis [BR:
pan03009
]
PODANSg7038
Enzymes [BR:
pan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PODANSg7038
Spliceosome [BR:
pan03041
]
Complex A
U2 snRNP components
U2 related factors
PODANSg7038
Complex B
PODANSg7038
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PODANSg7038
Ribosome biogenesis [BR:
pan03009
]
Eukaryotic type
90S particles
Helicases
PODANSg7038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
AAA_30
T2SSE
Flavi_DEAD
AAA
AAA_23
nSTAND3
Motif
Other DBs
NCBI-GeneID:
6194651
NCBI-ProteinID:
XP_001910001
UniProt:
B2B200
LinkDB
All DBs
Position
6
AA seq
805 aa
AA seq
DB search
MCLPNKKLRQPCGRHRQGKASANSEIPAIPSVLCRISHPISALTPLTFGMADQKGTKRSS
VESDAQDSKRIKTDDKPNPYLAHLNMDGANDFKSPLDEMERHNTTALQAAKAEDSDINPW
TGKPHSENYFKILRTRRDLPVSKQREEFLELYHKTQILVFVGETGSGKTTQIPQYVLYDE
MPHQTGKLIACTQPRRVAAMSVAQRVANELDVELGQEVGYSIRFENRTGPKTLLKYMTDG
QLLREAMHDPNMNRYSCIILDEAHERTLATDILMALLKEIAHRRNDLKIIVMSATLDAQK
FQSYFSLRKEDPPAPLLAVPGRTHPVEIFYTPEPERDYVEAAVRTVLQIHAVEPEGDILL
FLTGEEEIEDACRRISLEVDDMVRESDAGPLAIYPLYGTLPPHQQQKIFDKAPEPFRKGG
RPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNPRSRVESLLVSPISKASAQQRAG
RAGRTRPGKCFRLYTEKAFKKELIEQTYPEILRSNLSNTILELKKLGVEDLVHFDFMDPP
APETMMRALEELNYLACLDDDGGLTKLGSLASEFPLDPALAVMLISSPEFYCSNEILSIT
SLLSVPQIWIRPNNNRKRADEMKAQFAHPDGDHLTLLNAYHAYKGAEQNGEDVKKWCHEH
FLSFRHLSSADNVRAQLKRIMETHEIELVSTPFNNKDYYTNIRRALLAGFFMQVAMRESS
NSKIYKTVKDDQMVMIHPSTVVSSPYDWVVYNEFVLTTKQYIRTVTNEIAPVYYDVDTFE
KGEIKSALVRLTEKVKRRQAMKGGY
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttgccaaacaaaaagttgcggcagccttgtggacggcatcgacagggcaaggca
agcgcaaacagtgaaatccccgccattccatctgtcttgtgcagaatctctcaccccatc
tctgcactcactcctctcaccttcggaatggccgatcaaaagggcacgaagcgatcgagc
gtggaaagcgacgcccaggactcgaagcgcatcaagaccgacgacaagcccaacccatat
ctcgcccacctcaacatggacggcgccaacgacttcaagtcgcctctcgacgagatggag
cgccacaacaccaccgcccttcaggccgcgaaggctgaggactcggacatcaacccctgg
accggcaagccgcactcggagaactacttcaagatcctcaggactcgtcgcgacctgccc
gtctccaagcagcgcgaagagttcctcgagctctaccacaagacccagattctcgtcttc
gtcggtgagactggttccggcaaaaccacacagatccctcagtatgttctttacgacgaa
atgccacaccagaccggcaagctcattgcttgcacacagcctcgtcgtgtcgccgccatg
tcggtcgcccagcgtgtcgcaaacgaactcgatgttgaactgggtcaggaagtcggttac
agcattcgtttcgagaacaggaccggccccaagactctcctcaagtacatgacggatggt
cagctgctgcgcgaggccatgcacgatcccaacatgaaccggtacagctgcatcattctc
gatgaagctcacgaacgtacgctcgccaccgatatcctgatggccctcctcaaggagatc
gcccacagaagaaacgacctgaagatcattgtcatgtctgccacgctcgatgcgcaaaag
ttccagtcctatttcagcttgcggaaggaggaccctcctgcccctttgctcgccgttccc
ggtcgcacacaccctgtcgagatcttttacacccccgaacccgagcgagattacgtcgag
gccgccgtcaggacagttcttcagattcatgcggttgagcccgagggtgacatcctgctc
ttcctgacgggtgaagaggagattgaggatgcctgccgccggatcagtctggaggtggat
gatatggtcagagaatcagacgctggtccgctggccatctaccctctttacggtactttg
ccaccacatcaacaacaaaagatcttcgacaaggcccccgagccattccggaaggggggt
cgtcccggccgcaagtgcatcgtggcgaccaacattgccgaaacctcgttgacgatcgac
ggtatcgtctatgtcgtggaccctgggttcagcaagcaaaagatctacaaccctcgctct
cgtgtggaatcgctcttggtttctcccatctccaaggcctcggcccaacagagagctggt
cgtgccggtcgtaccaggccgggaaagtgcttccgtctctacaccgagaaggccttcaag
aaagagcttattgagcagacttatcctgaaattctccggtctaacctctccaacaccatt
cttgaactcaagaagcttggtgtcgaagatttggtgcactttgacttcatggacccacca
gcccctgagaccatgatgcgcgccctcgaggaactcaactaccttgcctgtctcgatgat
gacggtggtctcactaagcttgggagcttggcgtctgagttccccttggatcccgctctg
gccgtcatgctcatctcttctcccgagttctactgctccaacgagatcctctccatcacc
tcgttgttgtcggtacctcaaatatggatccgtcccaacaacaaccgcaagcgtgccgac
gagatgaaggcccagtttgcccaccccgacggcgaccacctgacgcttctcaacgcctac
cacgcctacaagggcgccgagcaaaacggcgaggacgtcaagaaatggtgccacgagcac
tttttgtcgttccgtcacctgtcctctgccgacaatgtccgggctcagctcaagcgcatc
atggaaacgcacgagattgagctcgtgtcgacgccgttcaacaacaaggactattacacc
aacattcggcgggcgctgctggcggggttttttatgcaggtcgccatgagggagagctcg
aatagcaagatttacaagacagtgaaggacgaccagatggtgatgattcatccgagcacg
gtggtgtcgagcccgtatgattgggtggtgtacaatgagtttgtgctcacgacgaagcag
tatatccggacggtgacgaatgaaattgcgccggtttattatgatgttgatacttttgag
aagggggagatcaagtctgcgctggtgaggttgacggagaaggtgaagaggaggcaggct
atgaagggggggtattga
DBGET
integrated database retrieval system
