Podospora anserina: PODANSg7048
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Entry
PODANSg7048 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pan
Podospora anserina
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pan03009
]
PODANSg7048
Enzymes [BR:
pan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PODANSg7048
Ribosome biogenesis [BR:
pan03009
]
Eukaryotic type
Pre-60S particles
Helicases
PODANSg7048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
6194431
NCBI-ProteinID:
XP_001910011
UniProt:
B2B210
LinkDB
All DBs
Position
6
AA seq
694 aa
AA seq
DB search
RGCPFVFKSDNRKTLQMAPVQPRVKKTPRTWDSLNQSLPPWILDYLQTSGFEQPTPVQKS
TLDLFRGNKDVVVEAVTGSGKTLAYLIPVVEKLLRGDEAAKRHHVQGIIIAPTRELAQQI
YNVCVSLIKFHPQSAEQLQHDRDEKRTITSEPVVYPQLLVGGTTKAAEDLSAFLRLSPNL
LIGTPGRLAELLASPYVKAPASTFEVLVMDEADRLLDLGFSQELNRILGYLPKQRRTGLF
SASLSDAVERLVTVGLLYPHRITVRVRNLRDGGEIQERKTPMSLQMSYLITPASQKIPAL
CQILEKLNPRPARSIVFFSTCFAVKYFAKVLHGVLPEGFSIVSLHGKLEPQVREKNFERF
VNSTSPSILLTTDIAARGLDIPQVDLVVQHDPPTDTKVFIHRCGRAGRAGRRGLAVVLLQ
PGREEGYLQLLEVRQTPCTPLERPEIVLSEEKAKEISTKVRKQAITDREVYQLAQRAFVS
WARSYIEHQASSIFRISDLDWVDLAHGYGLVELPKMPEIKGKNIDRSLGLGIDVEAIPFK
DKLREEKRLEELEKWKKEKAARVASQQENGERAGQKRKTNEAWSEKQDAEELKVARREKK
RKRKEAERASKMTEREREEHMKLEDMIELVRKQNEEKARQEAEERRKERVLGGDGKTFGA
FGKGGGSGGGVMTKKKMVVGEEDSDEEEFGGFDD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
aggggctgtccttttgtattcaaatccgacaatcgcaagacccttcagatggcgccagtt
caaccacgcgtcaaaaagacccccaggacttgggattcgttgaaccagagtctccctcca
tggatcctcgactatcttcagacgtctggcttcgagcagccgacgccagtgcagaagtcg
acactcgatcttttcagggggaacaaggatgtcgtcgtggaagctgtcaccggtagtggc
aagacgctggcttatttgattccagtggtcgagaaactcttgcgcggagacgaagcagcc
aagaggcaccatgtccaaggcatcatcattgcgcccacccgcgagctggcgcaacagatc
tacaacgtttgcgtcagcctcatcaagttccaccctcagtcggccgagcagctgcaacat
gaccgagacgagaagcgaaccatcacatccgaaccggtcgtctacccccagcttctggtg
ggaggaacgacaaaagcggccgaagacctaagcgcattcctgaggttatcaccaaacctt
ctcatcggcacacccggccgactcgccgagctcctcgcctccccttatgtcaaggccccc
gcctccacctttgaagtcctcgtcatggacgaagccgaccgtttgctggaccttggtttc
tcccaagaactcaaccgcatcctcggctacctccccaagcagcgccgcacaggcttgttc
agcgcctccctcagcgacgccgtagagcgcctcgtcacagtcggcttactatacccccac
cgcatcaccgtccgggtacgaaacctcagagacggcggcgaaatccaagagcgcaagacc
ccaatgtccctccaaatgtcgtacctcatcacccccgccagtcaaaaaatcccggcgctc
tgccagatcctcgaaaaactcaacccccgcccggcacgatccatcgtctttttctctacc
tgcttcgcggtaaaatactttgccaaggtcctccacggcgttctcccagaaggcttcagc
attgtctcactccacggcaaactcgagccccaagtccgcgaaaagaactttgagcgcttc
gtcaactcgacctccccatccatcctcttgaccaccgacatcgccgcccgcggtctggac
attccacaagtcgacttggtagtccagcatgacccaccgacagacacaaaggtgttcatc
caccgctgcggccgtgccggtcgcgccggacgtcgcggtttggcggtggtgttgctccaa
ccaggtcgtgaggaaggttatctccaactgctggaagtgagacaaacgccatgcacaccg
ttggaaagacccgaaattgttctttctgaagagaaagccaaggagatctcgacaaaagta
aggaaacaagccatcacggacagggaagtgtaccagctcgctcagagggcgtttgtttcg
tgggcgcgaagctacattgaacaccaagcctcttccatctttcgcatttctgacctggac
tgggtggacctagcccacggctacgggctggttgaactccccaagatgccggagatcaag
ggcaaaaacattgaccgctccctcggcctgggcatagacgtggaagccattccgttcaag
gacaaactccgcgaagagaagagattggaagaactggaaaaatggaaaaaggaaaaggcg
gctagggtggctagccaacaggaaaatggggagcgggcggggcaaaagaggaagacgaac
gaggcttggagtgagaagcaggatgcggaggagctaaaggtggcgaggagagaaaagaag
aggaagaggaaagaggcggagagggcgagcaagatgacggaacgggaaagggaggagcac
atgaagctggaagatatgattgagcttgtgaggaaacagaatgaggagaaggctaggcaa
gaggcggaggagaggaggaaggagagggtgttggggggggacgggaagacgtttggggct
tttgggaagggtggtggtagtggtggtggggtgatgacgaaaaagaagatggtggtggga
gaggaggacagtgatgaggaggagtttggcgggtttgacgattaa
DBGET
integrated database retrieval system
