Podospora anserina: PODANSg7947
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Entry
PODANSg7947 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pan
Podospora anserina
Pathway
pan03013
Nucleocytoplasmic transport
pan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PODANSg7947
03015 mRNA surveillance pathway
PODANSg7947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg7947
Enzymes [BR:
pan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PODANSg7947
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PODANSg7947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
6195695
NCBI-ProteinID:
XP_001910905
UniProt:
B2B4K5
LinkDB
All DBs
Position
2
AA seq
559 aa
AA seq
DB search
SDDLEPVPLTVSAPASLRPTSREHNLDGKDVICDSRSGPVSTTASWFRLPPQQSSAQAPA
PALLLATLGRCFTRILTENFHSLSTPQPIFTQVEAMADLASRISKPEEGAAPQVDDPTEG
ANSVGIVENAYDVEVKLADLQNDAESPLFSVQSFEQLGLPKAINDGLLAMNFKKPSKIQE
RALPLMISDPPTNMIAQSQSGTGKTAAFVLTCLARVDLAKPQQPQALLLAPSRELARQIQ
GVVQTIGQFCENLIVQAAIPGEVSRETGVRASIVVGTPGTVMDLIRRRQFDVSQLKLLVI
DEADNMLDQQGLGEQCVRVKTLLPKTIQILLFSATFPDNVHRFAQQFAPKANEIKLRHTE
LTVKGISQMYMDCPDEGKKYDVLCKLYGLMTIGSSVIFVRTRESANEIQRRMEADGHKVS
ALHGAFEGQNRDALLDDFRSGRSKVLITTNVLARGIDVSSVSMVINYDIPMKGPGAGVPD
YETYLHRIGRTGRFGRVGVSISFVYDRRSYEALSDIANHYGIDLVQLSPDDWDLTEKKVQ
DVIKSSRARPDYAPNALGN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
tctgacgacctcgagcccgttcccctcacagtaagtgctcctgcatctctacgaccgacc
agtcgcgaacacaaccttgacggcaaggacgtgatctgcgactcgcggtcagggccagtt
tccacaaccgccagttggtttcgtcttcctccacaacaaagttccgcccaggcacctgca
cctgcccttctactggcaaccttaggtcgctgttttacgcgtatattaactgagaatttc
cacagtctctctacccctcaaccaattttcacccaagtcgaagccatggcggacctcgcg
agccgcatctccaagccggaggagggcgctgccccccaagttgatgacccgaccgagggt
gccaatagcgttggcatcgtcgagaacgcctacgacgtcgaggtcaaactcgccgacctt
caaaatgatgccgaaagcccgctcttctccgtccagtctttcgagcagcttggcctcccc
aaggcgatcaacgatggccttttagctatgaacttcaagaagccatccaagatccaagag
agagccctccctctcatgatcagcgaccctcctacaaacatgattgctcagtcccagtcc
ggcaccggcaagactgctgctttcgttctcacttgcctggcgcgcgtggacctcgccaag
ccgcaacagcctcaagctctccttctggctccgagcagagagcttgctcggcaaattcag
ggcgtcgtccaaacaatcggtcaattttgtgagaacttgatcgtgcaggccgccatcccc
ggcgaagtctcgcgtgagactggtgtcagggccagcatcgtggtaggaactccaggcacc
gtcatggacctgatcagacgtcgccagttcgatgtgtctcagctgaagctactcgttatt
gacgaggcggacaacatgttggaccagcagggtctcggtgagcagtgtgtgcgtgtcaag
actctactccccaagaccatccaaattcttcttttttccgccaccttcccagacaatgtc
caccggttcgcgcagcagtttgcgcccaaggcgaacgagatcaagctccgacacacggag
ctgacagtcaagggtatttctcaaatgtacatggattgcccagacgagggcaagaaatat
gatgtgctttgcaagctctatggtctcatgaccattggctcgtccgtcatcttcgtccgc
actcgtgagagtgccaacgagattcagcgccgcatggaggctgatggccacaaggtgtct
gcccttcacggtgccttcgagggccagaaccgtgatgctctcctcgacgacttccgctcc
ggtcgttccaaggttctcatcaccaccaacgtcttggctcgtggcattgatgtgtccagc
gtgtccatggtcatcaactacgacattccgatgaagggccccggcgctggcgtgccagac
tacgagacctatcttcaccgtatcggccgtactggtcgttttggtcgtgttggcgtctct
attagtttcgtctacgacagacgaagctacgaggccctttcagacattgccaatcactac
ggaatcgaccttgttcagctcagccctgacgactgggacttgactgagaagaaggtgcag
gacgtgatcaagtcgagccgtgcccgccccgactacgctcctaatgcccttgggaattag
DBGET
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