Podospora anserina: PODANSg8518
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Entry
PODANSg8518 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pan
Podospora anserina
Pathway
pan03013
Nucleocytoplasmic transport
pan03015
mRNA surveillance pathway
pan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PODANSg8518
09122 Translation
03013 Nucleocytoplasmic transport
PODANSg8518
03015 mRNA surveillance pathway
PODANSg8518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg8518
03041 Spliceosome [BR:
pan03041
]
PODANSg8518
03009 Ribosome biogenesis [BR:
pan03009
]
PODANSg8518
03012 Translation factors [BR:
pan03012
]
PODANSg8518
Enzymes [BR:
pan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PODANSg8518
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PODANSg8518
mRNA cycle factors
Stress granule specific factors
PODANSg8518
Spliceosome [BR:
pan03041
]
Complex C
Other components
EJC/TREX
PODANSg8518
Ribosome biogenesis [BR:
pan03009
]
Eukaryotic type
90S particles
Helicases
PODANSg8518
Translation factors [BR:
pan03012
]
Eukaryotic type
Initiation factors
eIF-4
PODANSg8518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
TniB
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
6195600
NCBI-ProteinID:
XP_001911476
UniProt:
B2B676
LinkDB
All DBs
Position
2
AA seq
488 aa
AA seq
DB search
MKARTHGRTRASTRACHFLPEFGRGKSLGGSRCSCAAPQSKLSRRLNFQQRIPLELLFEL
ASTHLNHIRPSTIHSTPSLPVCANSKIKMAEGGIDRKADEKLTFSTSKEVTVHPTFESMS
LKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAV
RETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTP
GRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVVVSATLPHD
VLTMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFC
NTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQ
QVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDVRILRDIELYYSTQIDEMP
MNVADLIA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacggacgcacggacgcacgcgcgcgtccacgcgagcttgtcattttctgccg
gagtttggccggggaaaaagtttgggtgggtcgcgctgttcttgcgccgccccacagtcc
aagttgtcgcgccgcctcaactttcagcagcgcattccactggaacttttgtttgagctt
gcttcaacccacctcaaccacatacgtccatcaaccatacacagcaccccatctctcccc
gtttgcgccaactcgaaaatcaagatggctgaaggtggtattgatcgcaaggccgatgag
aagctcacgttctcgacctcgaaggaggtcacggtccacccaactttcgagtccatgtca
ttgaaggagagtctccttcgtggtatctatgcctacggctacgagtcgccgtccgccgtc
cagtccagagctatcgttcagatttgcaaaggtcgcgataccattgcccaagcccaatcc
ggtactggtaaaacggcaactttctccattagtatgctccaagtcatcgataccgctgtg
cgcgagacccaggctcttgtcctttcaccaacccgcgaacttgcgacacagattcagagc
gttgtcatggcgttgggtgattacatgaacgtgcagtgccatgcctgcattggtggaaca
aacgtgggcgaggatattcgcaagctcgactacggccagcacatcgtatccggcacccct
ggccgtgttgccgacatgatcagacgtcgccacttgcgcacccgccatatcaagatgttg
gttctggatgaagccgacgaactgctcaaccagggtttccgggagcagatctacgatgtg
taccgctacctgccacccgccactcaggttgtggttgtgtccgctactcttccccacgat
gtccttaccatgacgaccaagttcatgaccgatcccgttcgtattctcgtcaagcgtgac
gagttgacgctcgaaggcctcaagcaatacttcattgccgtcgaaaaggaggactggaag
tttgacaccctgtgcgatctctacgatacccttaccatcactcaagccgtaattttctgc
aacacaaggagaaaggtcgactggctgacagacaagatgagggaggccaacttcactgtc
agcagtatgcacggtgacatgccacaaaaggagcgtgacagcattatgcaggatttcaga
cagggcaacagcagagtgttgatctcgaccgatgtgtgggctcgtggtatcgacgttcaa
caagtcagtctggtcatcaactacgaccttcccagcaatcgtgagaactacatccaccgc
atcggtcgttcgggcagattcgggcgtaagggtgtcgctatcaacttcgtgacgacggag
gatgtgcgcatcctccgcgatatcgagttgtattactccactcagatcgacgaaatgccc
atgaacgtggccgacctcattgcttga
DBGET
integrated database retrieval system
