Podospora anserina: PODANSg8826 Help Entry PODANSg8826       CDS       T01048                                  Name (RefSeq) hypothetical protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism pan  Podospora anserina Pathway pan03013   Nucleocytoplasmic transport pan03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:pan00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     PODANSg8826    03015 mRNA surveillance pathway     PODANSg8826  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pan03019]     PODANSg8826 Enzymes [BR:pan01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      PODANSg8826     5.6.2.5  RNA 5'-3' helicase      PODANSg8826 Messenger RNA biogenesis [BR:pan03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      PODANSg8826    mRNA cycle factors     Common to processing body (P body) and stress granule      PODANSg8826 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD NPHP3_N UvrD-helicase Helicase_RecD Viral_helicase1 PIF1 SLFN-g3_helicase AAA_22 nSTAND3 ATPase SRP54 AAA AAA_16 Ribosomal_S13_N AAA_5 Motif Other DBs NCBI-GeneID:  6195906 NCBI-ProteinID:  XP_001911781 UniProt:  B2B731 LinkDB All DBs Position 2 AA seq 1090 aa AA seqDB search MEDAFNHLGNHLVSDSAATINATADDFDDETESFLGDLKEHGSPTNALRRHDDNDNQGPE DFRDDDSNFSGPRNDVNSRGPEEEKELPAHACAYCGIHSPSCVVKCIAKECNKWFCSARG NSSSSHIVNHLVRARHKEVQLHPESALGDTTLECYNCGNKNVFMLGFIPAKSDTVVVLLC RQPCAAGSSAKDMSWDVSRWQPLIEDRSFLNWIVSPPTDAEQLRARHLTPPMIAKLEEMW KEAPSATVADLEKGTGVDDDPHPVLLKYDDPYHYQNVFGPLVKMESDYDKKLKEAQSEDH LVVRWDMGLNNKHLASFILPKIESGDVKLAVGDEMRIKYKGELRAPWEGVGYVIKIPNNQ SDEVTLELRKAANDKSVPTECTHNFSADYVWKATSYDRMQFAMKTFAVDELSVSGYIFHK LLGHEVAVAPMKTQMPKRFHVPGLPELNHSQITAIKTVLSTPLSLIQGPPGTGKTVTSAT IIYHLARMNNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQ VRLYKQSSELTNLNKLKAAAGELSSQDEKRFKQLTRQAEREILNSADVVCCTCVGAGDPR LSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSL FERLVKLNLVPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTITERLRKDVDFPWPVAET PMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVKPSDIGVITPYEGQRSYIV STMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALT RAKYGLVIIGNPKVLSKHELWHHLLVHFKDRKCLVEGPLTNLQTSLIQFSRPKMSFRPRH NAQAQHVSGGYTNGRGYGGGVNGSHRDFDTGSVLSYANGIPDDVSSIHSSALGGAGLTSA YPQMFSNFHPEQWPGLPGANPASRPGAKGRARIAESVAGESVANSEFTDASASVIGGKGV GQGGASLGAGLSEAISSARPTSYSRSDRLKQYVESGGRSLGLGSGYGRRFDDDEKSVSTA FASQIGTGFD NT seq 3273 nt NT seq  +upstreamnt  +downstreamnt atggaggacgccttcaaccacctcggaaaccaccttgtttccgactctgccgccaccatt aatgccaccgccgacgacttcgacgatgaaaccgagagcttcctgggcgatcttaaggaa cacggctccccgacaaacgccctccgtcgccatgatgacaatgacaaccagggccccgaa gacttccgcgatgatgacagcaacttcagtggcccaagaaacgatgtaaactcgagaggt ccagaagaggaaaaggagctgcccgctcacgcttgcgcgtattgcggcattcactccccg tcctgtgtggtcaagtgcattgcaaaggaatgcaacaagtggttctgcagtgctcgtggt aattcgagttcctcacatattgtcaaccaccttgtacgagcccgccacaaggaggttcag cttcatcccgagtcagcccttggcgataccaccctcgaatgctacaactgcggcaacaag aatgtctttatgctgggcttcatccccgccaaatccgataccgttgtcgttcttttgtgt cgccaaccttgcgctgctggcagttcggccaaggacatgagctgggatgtttcgcgatgg caacccctcatcgaggatcggtcctttctcaactggattgtctccccaccgaccgacgcc gaacagcttcgagctcgccatttgaccccgcccatgattgcgaaacttgaggagatgtgg aaagaggctccaagtgccactgtcgccgatctggagaaaggaaccggcgtagacgacgat ccacatcccgtgctcctgaagtacgatgatccgtaccactatcagaatgtctttgggccc cttgtgaagatggagtcggactatgacaagaagctcaaggaagcgcagtctgaggaccac ctcgtggttcgctgggatatgggtctgaataacaagcacctggccagctttatcctgccc aagatcgaatccggcgatgtcaaattggccgtgggcgatgagatgcgcatcaagtacaag ggcgaacttcgtgccccatgggagggtgttggatatgttatcaagatccccaacaaccag tcggacgaagttacccttgagttaagaaaggcggcgaacgacaaatcggtccccaccgaa tgcacgcacaacttttcggccgactatgtctggaaggccacgtcctacgaccgtatgcaa ttcgctatgaagaccttcgctgtggatgagctcagtgtttctgggtacattttccataag ttgctgggccacgaggtagccgttgctcccatgaagacgcagatgccgaagaggttccac gttccagggttgcctgagttgaatcacagtcagatcactgccatcaagactgttctgtcc acccctctcagtttgatccaggggccgccaggtaccggaaagacggtcacctcagccacc atcatctaccatcttgccagaatgaacaatagtcaggttctcgtctgcgccccctccaac gttgctgtcgaccagctttgcgaacgtattcaccgcacgggtctcaaggtcgttcgcttg acagccaagtctcgtgaggatgtcgaatcgtccgtcagcttcttggccctccacgagcag gtccgcctttacaagcagagcagtgagctcacaaatctcaacaagctcaaggccgccgca ggtgaactgtcttctcaggacgagaagaggttcaagcaactgactcgccaggccgagagg gagattctcaacagcgctgatgtcgtgtgctgcacttgcgtcggtgccggcgacccgaga ctgtccaaaatgaagttccgaaacgtgctgatcgacgagtctactcagtcagctgagccc gagtgcatgattcctcttgtcctcggatgcaagcaggttgttcttgttggtgatcacaag cagctcggccccgtcatcatgaacaagaaggcggccaaggctggtcttaaccagtctctg ttcgagaggttggtcaagctcaacctggttcccattcggctcaacgttcagtatcgtatg cacccttgcctttcagaatttccttccaacatgttttacgaaggatcgctccagaacggt gtcaccataactgagcggcttcgcaaggatgtcgatttcccctggcctgttgctgaaact ccgatgatgttctggtccaacttgggcaatgaagaaatttcggcatccggaacatcttac ctgaaccgcaccgaagcttccaacgtggagaagattgttactcgcttcttcaaggctggt gtgaagccgtctgatatcggtgtcattactccgtacgaaggccagcgcagctacattgtc agcaccatgcagaatacgggcactttcaaaaaagagagctacaaggaggtcgaggttgct tcggtcgacgctttccagggccgtgagaaggactttatcgttctttcttgcgtccgttcc aacgacaaccagggcattggtttcttgtccgaccctcgtcgtctcaacgtcgcgctcact cgagccaagtatggtcttgtcatcatcggcaaccccaaggttctgtccaagcatgagtta tggcatcatcttcttgttcactttaaggatcgcaagtgtttggtggaaggccctcttacc aaccttcagacttccctcatccagttcagccggcccaagatgagcttccgtccccgccac aacgcacaggcccagcatgtgtctggtggttataccaacggcagaggttatggcggcggt gtcaacggctcccaccgcgatttcgacactggctcggtgctttcgtatgctaacggtatt ccggatgatgtctcgtccattcacagctctgccttggggggtgcgggccttacatcggcc taccctcagatgttctccaacttccatccagagcagtggcccggcttgcccggggccaac ccggctagccgtcccggggccaagggtcgtgctcgcattgctgagagtgttgctggcgag agcgttgccaacagcgagtttacggatgcgagtgcgagtgttattggtggcaagggcgtc ggtcagggtggtgcgagcctgggagctggtcttagcgaggctatcagctcggctcgtcct acctcgtacagccgtagcgaccgtctcaagcagtacgtggagagcggcgggcgcagtctt ggcttgggcagcggatatggccgtcgcttcgatgatgacgagaagagcgtcagcacagcg tttgctagtcaaattgggacagggttcgactga

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