Podospora anserina: PODANSg8998 Help Entry PODANSg8998       CDS       T01048                                  Name (RefSeq) hypothetical protein   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism pan  Podospora anserina Pathway pan03008   Ribosome biogenesis in eukaryotes pan03018   RNA degradation Brite KEGG Orthology (KO) [BR:pan00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     PODANSg8998   09123 Folding, sorting and degradation    03018 RNA degradation     PODANSg8998  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pan03019]     PODANSg8998    03009 Ribosome biogenesis [BR:pan03009]     PODANSg8998    03016 Transfer RNA biogenesis [BR:pan03016]     PODANSg8998    03036 Chromosome and associated proteins [BR:pan03036]     PODANSg8998 Messenger RNA biogenesis [BR:pan03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      PODANSg8998   mRNA degradation factors    5'-3' decay     5' exonucleases      PODANSg8998 Ribosome biogenesis [BR:pan03009]  Eukaryotic type   Pre-60S particles    RNases     PODANSg8998 Transfer RNA biogenesis [BR:pan03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     PODANSg8998 Chromosome and associated proteins [BR:pan03036]  Eukaryotic type   Gene silencing    piRNA pathway     PODANSg8998 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N XRN1_D2_D3 XRN1_D1 SH3_12 R3H Motif Other DBs NCBI-GeneID:  6195474 NCBI-ProteinID:  XP_001911953 UniProt:  B2B7K3 LinkDB All DBs Position 2 AA seq 1419 aa AA seqDB search VPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDDVQQARISEEQMF IAIFNYIEHLFGKIKPKTLFFMAIDGVAPRAKMNQQRARRFRTALDAERARDKAIQEGKE LPKEPPFDSNCITPGMLLPPDVWFSLKYFINKKVSEDKDWQGPEIVLSGHEVPGEGEHKI MEYIRNARAQPDYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVQFGRVKDQHKVKE LEHQNFYLMHLCIVREYLELEFQELKVPGAIPMPFDMEKVIDDFILMAFFVGNDFLPNLP RFHINEGALATMFKIYKEVLRKCDGYINENGRVNLKRLAILLEELGREEYRFFEHENEDA GWLRGKKMLEHDEAEIARARVKGKLIISSDQKTLWKTKIRKFLTNRNSQTLDLGTGLNAA DRKFVQDLADAAHIEWATKEDDDGRRHLILTFPVRDDEDEEDEEAQSASLRIVKKYDSAQ VLDLTGADAQSAMEAKYKQKFQEWKDGYYKDKFPEWAEGKHEDELRKLAENYVQGLQWVL FYYYRGIASWPWFYRYHYSPLVSDVVKGLGADLNFTLGQPFRPNEQLMGVLPDRSKSIVP TVYWPLMTDKDSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLDAMAPKNDLLSD EEKARNDFGVALKFTYSPDVDFEYASSLVDVFPHIPHCHCVENIFDLPPVEGLEYRAGLT DGALLNAEALAGFPSLATLPYTASLGFHGVNVFKQDSRNESMVVNLIGTEMRTKVESAKV KLGQRCFVGYPFLQEAKIVGVSDELFDYVLDGNGQVATLHHGHREIEEFGKKANKIENFY SKRMGILIGPVESLVRVQMLKGLIKTDEGATIKEYGDIPGMETDYASQIIVDEVANEDER FIEKAALPLEEEFPVKSIGFFLGDFNYGQPLEVSGYTNGKLQVWLATLESREPDFAKRII YESERGNSYMPSYMVAKQLDLHPLALSKITSSYFVKTVGDLRVNLGLNLKFEGKKQKVLG YSRKSQTGWEFSSAAVHLIVQYMTNFPDFFAGVKRNPSGAELKETDLWSDPNLATARVKE IGAWLKTLKTNSMERVPLDAEQLDSEVVMRIAAEADSLKLSAIPTVPKKMNGVPRNALLR PDDAEHRLGNQHFALGDRVVYVARTGKVPIAFRGTVVGISRTPTAKLLDVVFDVTFMSGT TLGGRCPPFRGQTVPSTTLLNLTGRQVVAGSKNQLARQPVTPSVTTLTTHGGYHMHQGKR LQDAGAPSQAAWGRGGRGGRGGGRGGYGGPSQDGSNGSASAPPMYGAVPPPSSLDAPRGG RARGRGRGNGGQRGGQQHNNLAFRPAPQQQQQQQQQQVDGQNGENSRGGRGGRGGFRGTP YAGRGRGGPRGGARGGQGQGQGQQQQQQQQSVAIPPSAS NT seq 4260 nt NT seq  +upstreamnt  +downstreamnt gttcccaagtttttcagatggctctctgagcgttacccggcgatatcgcaactcattgcc gagaatcgaattcccgagttcgactgcctctacttggatatgaatggtatcattcataat tgtacccacaaggactcggatgatgttcagcaggcccgtattagcgaagaacaaatgttc atcgctatattcaactatatagaacatctcttcggtaagatcaaaccgaagacgctgttc ttcatggccatcgatggtgtcgccccgcgcgccaaaatgaaccaacagcgtgctcgtcgc ttcagaactgctttggacgctgagagggcccgtgataaggccattcaggagggcaaagag ttgcccaaggagccaccgttcgactccaattgcatcacgccaggtatgttgctgccacca gacgtctggttttcgctcaagtacttcatcaacaagaaggtgtctgaagacaaggactgg cagggtcccgagattgtcctgtcagggcacgaggtccctggtgagggtgagcacaagatc atggagtacatccgcaacgcacgcgcgcaaccggactacaaccccaacgtccgccactgc ttgtacggcctcgatgccgatctcatcatgttgggtctcctgagccatgacccacacttc tgcctcctccgagaagaggttcagtttggccgcgtcaaggaccagcacaaggttaaggag ttggagcatcaaaacttttacctgatgcatctctgcatagttcgagagtacttggagctg gagttccaagagctcaaagtaccgggcgcaatccccatgccgttcgatatggaaaaggtc attgatgacttcatcttgatggccttctttgtgggcaacgatttcttgcccaatcttcct cgctttcacatcaacgagggtgcgttggccaccatgttcaagatttacaaggaggtactt cgaaagtgtgatggatacatcaatgaaaatggcagagtgaatctcaagaggctagccatt ctcttggaggagcttgggagagaagagtaccggttctttgagcatgaaaacgaagatgcc ggctggctgcggggcaagaagatgcttgaacatgacgaggccgagattgccagggctcgt gtcaagggcaagctgatcatcagctcagatcaaaagacgctgtggaagacaaagattcga aagtttctgaccaaccggaattcgcaaactcttgatctcggcaccggcctaaatgcggcc gaccgcaagttcgtccaggatctggctgatgctgcgcacattgagtgggctaccaaggag gacgacgatggacgtcgtcaccttatcctgaccttccctgtgagagacgacgaagacgag gaggacgaggaagcgcagtcggcatctcttcgcattgtgaagaagtacgacagtgcccaa gttctcgacctgacaggtgccgatgcccagtccgccatggaggccaagtacaagcaaaag ttccaagagtggaaggacggctactacaaggacaagttccccgagtgggccgaggggaag cacgaagatgagttgcgcaagctcgcagaaaactacgttcaaggtcttcagtgggtgctc ttctactactatcgtggaattgcgtcgtggccgtggttctaccgctatcactactcccct ctggtctcagatgtcgtcaagggtttgggtgcagacctcaacttcaccctgggccagccg ttcaggccgaacgaacagctcatgggtgtcttgcccgaccgcagtaaaagcatcgtgcct accgtatactggcccctcatgacggacaaggactcgcccatcatcgatttctatccccgg gatttcgagctcgacatgaacggaaagaagatggactgggaggccgtcgtcaagatcccc ttcattgacgaaaagcgcctcctcgacgccatggctcccaaaaacgatcttctttccgac gaggagaaggcacgcaacgacttcggtgtggccctcaagtttacgtattctccagatgtc gattttgagtatgcctcatccttggtggatgttttcccgcacatccctcactgtcactgt gtcgaaaacatctttgatcttcctccggtcgaaggtcttgagtaccgcgccggcctcacc gatggcgctctgttgaatgccgaggctttggctggattcccatctctcgccaccctgcct tatacggctagccttggcttccatggagttaatgtgttcaagcaagacagccgcaacgaa agcatggtggtgaacctcatcggcaccgagatgagaaccaaggtcgagagtgccaaggtc aagcttggacagcgctgctttgttggttatcctttcctccaggaggccaagattgttggg gtatctgatgaactcttcgactatgtcctcgacggaaacggtcaggtggccacccttcac catggccatcgtgaaatcgaagagtttggcaagaaggccaacaagattgagaacttttac agcaagcgtatgggtatcttgattggccctgtcgagtccctggtcagggtccaaatgttg aagggtctgatcaagaccgacgagggcgcgacaatcaaggagtacggcgacatcccgggc atggagacggactatgcttctcagatcattgtcgacgaggttgccaacgaggacgagcgc tttatcgaaaaggccgccttgccgcttgaggaagagttccccgtcaaatcgataggtttc ttcttgggcgacttcaactatggtcagccattggaagtatctggctacaccaacggaaag cttcaggtctggcttgccacccttgaaagccgggagcctgactttgcgaagcgcatcatt tacgagtcggagcggggcaactcttacatgccatcctacatggtcgccaagcagctcgac ttgcaccccttggcgctcagcaagatcacctcatcttactttgtcaagacggttggtgat cttcgcgtgaacttgggtctcaacctcaaatttgagggtaagaagcagaaggtgctcggg tactctcgcaagtctcagaccggttgggagttcagtagtgctgccgtgcacctgattgtt cagtacatgaccaacttccccgactttttcgccggtgtcaagaggaacccttcgggcgcc gagttgaaggaaaccgatctctggagtgaccctaatctggccacagcccgggtcaaggaa atcggtgcctggctcaagacgctcaagaccaactcgatggagcgcgtccctcttgatgcc gagcagctggactctgaggtcgtcatgaggattgctgcggaggctgacagtctcaagctc agcgctattcctactgttcccaagaagatgaatggcgtgcccaggaatgcgcttttgagg cccgacgatgccgaacatcgcctgggcaaccagcacttcgccttgggagaccgcgtggtg tacgttgcccgcaccggcaaggtccccatcgccttccgcggcactgtggttggtatcagc cgcacccccacggccaagttgttggatgtcgtctttgacgtcacgttcatgagcggcact actctcggtggccgctgtccgccgttccgcgggcagactgtgccgtctactacccttctc aaccttaccggacggcaggttgttgccggttccaagaaccagctcgctcgccagcccgtc acaccatcagttaccaccttgactactcatggcgggtatcacatgcaccagggcaagcgt ctgcaagatgccggtgctccttctcaagctgcttggggacggggtggacggggtggtcgc ggcggtggcagaggtgggtacggtggacccagccaggacggcagcaatggttctgcttct gctccgccgatgtatggggctgttccgcccccttccagccttgatgctcctaggggagga agagcgcgcggacgtggtcgcggcaatggtggtcagaggggagggcaacagcacaacaac cttgccttccgccctgcgcctcagcagcagcagcagcagcagcagcagcaggttgatggt cagaatggagaaaattcacgtggaggccgtggcgggagaggtggctttagaggaacgcct tatgctggccggggcagaggtggtcctcgtggtggcgctagaggtggccagggtcagggt cagggtcagcagcagcagcagcagcaacaaagcgtggcgattcctccttccgcgagctag

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