Podospora anserina: PODANSg937
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Entry
PODANSg937 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
pan
Podospora anserina
Pathway
pan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PODANSg937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg937
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PODANSg937
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PODANSg937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
RRP40_S1
ECR1_N
ParB_C
Motif
Other DBs
NCBI-GeneID:
6187976
NCBI-ProteinID:
XP_001903920
UniProt:
B2AE31
LinkDB
All DBs
Position
4
AA seq
358 aa
AA seq
DB search
MPITILSLKPSHPPPSPHDISDSDSDLSSDDGGGGAHLDFRLPRPPLPPKSTHLFQQLSS
SQTWSPPAPSSPQTPKWMRGHGTYIPPSTTNITSSLAGITTRTNKLISVSPLRARYTPEV
GDLVVGRILEVQAKRWRVDINSIQLASLPLSAINLPGGILRKRTETDELQIRTFFAEGDL
VVAEVQQLFQDGGAILHTRSLKYGKLRNGLFVALSGQGGGSGVVRSRRQVWTMEGQNGGG
KMDVILGVNGYVWISKHVEQVAKELEQKHMGITNMEENVSAGVYSSQNDFIDSATMREIA
RLRNVVTALVENGCRVDEDMVIRGYAEACEMAMLGETGAEDIYLGGQRGEELTRTLRN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcacaattctctctctcaaaccctcccacccacccccttccccccacgacatc
tccgactccgactccgacctctccagcgacgacggcggaggaggcgcccacctcgacttt
cgcctccctcggcctcctctcccaccaaaatccacccatctctttcaacagctctcttct
tcacaaacctggtcacccccggcaccctcatcaccccagacccccaaatggatgcgcggc
cacggcacctacatcccccccagcactacaaacatcacctcctccctcgccggcatcacc
acacgcaccaacaagctcatctccgtctcccccctccgcgcccgctacacccccgaggta
ggcgacctagtagtaggccgcatcctcgaagtccaagccaagcgctggcgcgtagacatc
aactcgatccagctcgcctccctccccctctcagccatcaacctccccggcggcatcctc
cgcaagcgcacagaaaccgacgagctccaaatccgcaccttcttcgccgagggcgacctc
gtcgtcgccgaagtgcagcagctcttccaggacggaggcgcaatcctccacacgcgctcg
ctcaaatacggaaaactccgcaacgggctgtttgttgctctttctgggcagggcggcggg
tccggggtggtacggtcgaggagacaggtctggacgatggaggggcagaacggagggggg
aagatggatgttatactgggggtgaatggttacgtctggatcagcaagcatgttgagcag
gtggccaaggagctggagcagaagcatatggggattacgaatatggaggagaatgtcagc
gcgggggtgtacagcagtcagaatgactttattgacagcgctaccatgagggagattgct
agactgaggaacgtcgtgacggcgttggtggagaatgggtgcagggtggatgaggatatg
gtgatacgggggtatgccgaggcttgtgagatggccatgttgggggagacgggggcggag
gatatctatttgggcgggcagaggggggaggagttgacaagaacgttgaggaattga
DBGET
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