Podospora anserina: PODANSg973
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Entry
PODANSg973 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pan
Podospora anserina
Pathway
pan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PODANSg973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg973
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PODANSg973
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PODANSg973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WKF
DUF7310
Poty_PP
CENP-Q
Nnf1
EAD9
Motif
Other DBs
NCBI-GeneID:
6188034
NCBI-ProteinID:
XP_001903956
UniProt:
B2AE67
LinkDB
All DBs
Position
4
AA seq
710 aa
AA seq
DB search
MSPFFTPTELQSSPRFGSHIPTTPTLERKADCLPPSYLVARRPATKRTPHPKPYVSYSAA
PLPARWRHESCSRKSTIEQSTNQAQKEKLEDQLKREIKKLQRLRDQIKTWAASNDIKDKG
PLLEQRRLIETKFKAVEKAMKTKAYSKEGLSAATKLDPKEQAKLEASEFLSNMVDELEQQ
IETLEAEGESIQATMKKGKGQATKLERIAEIERIIERHKWHQGKLELIRRSLENGGVETE
QVTDLEESIKYYVSDGMNDDFPEDEGMYDDLNLEEEEDAFGMNLENDKGSSQDTQSVQEE
PAPEPEMTRPAAAAPVGKQRTVADAVTGSATRRPSAQKSPLPTLATVHNSQTTNSNGVQA
NVAMKPAALPTRPAEGLKYASAAAAAAASDKNNVGIAPLPPPPGAPPASAASPLAPSQPR
TSTTNSPSTAPIQPVVQDRAPLQTAQPPAKEAPKSAASKGKAPVQPPTVTPAAPDHGDAT
PARGLFRQSKTGLDGQGANRCFKAGSASTQGAPVSAPVPAANGVSNGIKPIEEEEEDEEE
ESIYHLPAALQDLVESYEVTKKRTASINSPLTQRMHITSEAAKPEAADAEPPRAYVPETK
YLAHTHFPQEPLDILDDPRLYERIEPDTLFYVFYYKQGTYQQYLAARALKDQSWRFHKQY
QTWFQRHEEPKSITEEFEQGTYRFFDYESTWMNRRKADFKFAYKFLEDEV
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccttttttacgccgacagagctgcaatcatccccacgctttggcagtcatatt
ccgactactccaaccctggagagaaaggctgattgcctgcccccgagttatttggtcgcg
cgacggccagccaccaaacgaacccctcatcctaaaccttacgtttcctacagcgcagca
ccactaccagcgagatggcggcacgaaagctgcagcaggaagtcgacaattgagcagtcc
accaatcaggcgcaaaaggagaagctagaagatcagctgaagcgagaaatcaagaagttg
cagaggctgcgcgatcagatcaagacatgggctgctagcaatgatatcaaggataagggg
ccgctgctggagcagcggaggctgatagagacgaagttcaaggctgtcgaaaaggcgatg
aagacgaaggcgtactctaaagaggggttatcagccgccaccaagctggaccccaaggag
caagcgaagctggaggcaagcgaattcctgagcaacatggttgacgaactcgagcagcaa
atcgaaaccctcgaggccgaaggcgaatcgatacaagccaccatgaagaagggcaagggc
caggcaaccaagctggagcgcatcgccgagatagagcgcatcatcgaacggcataaatgg
caccaagggaagctggagctgattcgccgctcactcgaaaatgggggcgtcgagaccgag
caagtcacggacctagaggagagcatcaagtactacgtgtccgacggcatgaacgacgat
ttccccgaggacgagggtatgtacgacgatctaaacctggaagaagaggaggatgccttt
ggtatgaatctggagaacgacaagggctcatcacaggacacccagtcggttcaagaggag
ccagcccctgagcccgagatgacaagaccggcagctgctgctccggtcgggaagcaacgc
acggtggccgatgctgtgacagggtcggctacacgacgtccctcggcccaaaagtcaccc
ctcccaacgctcgcaaccgtccacaactcgcaaacaaccaacagcaatggggtccaggcc
aatgttgccatgaagccggcagcgctaccaacccggcccgccgagggtttgaagtatgcc
agcgcagcagcagccgctgccgcaagcgataagaacaacgtgggcattgcgcctttaccc
cctccgccaggtgctcctccagcatccgccgcctctccgttagcaccaagtcagccgagg
acaagtactaccaactctcccagcacagcacccatacaaccggtggtgcaggacagggca
cccctacaaactgcccagccgccagccaaggaagcgcccaaatctgcagcatcaaagggc
aaggctcctgtacaaccgccaaccgtcacaccagcagctccagatcacggagatgccacc
cccgcgcgaggtttgtttaggcagtcaaaaactggacttgacgggcaaggagctaacaga
tgtttcaaagcaggttcggcgtcaacacaaggggctccagtatcagcaccagtaccggct
gcgaacggcgtttctaatggcatcaagccaatcgaggaggaagaggaagatgaagaggaa
gagtcgatatatcatctccccgcggccctccaagacctggtggaatcatacgaagtgacc
aagaagcggacggcgtcaataaactcaccattgacccagaggatgcatatcacatcggaa
gcggctaagcctgaagctgcggatgccgaaccaccccgcgcgtatgtgccggagacgaag
tacctcgcgcacacacacttcccacaagagccgctagatatcctggatgacccacgactg
tacgaacgaatcgagccagacacactcttttacgttttctactacaagcaggggacatac
cagcaatatcttgccgcgagggctttgaaggaccagagttggaggttccataaacaatac
cagacatggttccagagacacgaagagccaaagtcgattaccgaagagtttgaacagggg
acgtaccgcttcttcgattatgagagcacatggatgaaccgcaggaaggcagattttaag
tttgcctacaagtttctcgaggatgaggtttga
DBGET
integrated database retrieval system
