Planococcus antarcticus: BBH88_00170
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Entry
BBH88_00170 CDS
T04428
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
pana
Planococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pana03021
]
BBH88_00170
Transcription machinery [BR:
pana03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBH88_00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_37
HNF-1_N
DUF1492
DUF134
HTH_23
GerE
HTH_3
Packaging_FI
KORA
Sigma70_ECF
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ANU08861
UniProt:
A0A1C7DC23
LinkDB
All DBs
Position
555933..556715
Genome browser
AA seq
260 aa
AA seq
DB search
MSKQSHPNQPTKEQVLEWIEAYQKTEDEEAQTNLVLNYKRLVESIARKYSNGKSYHEDIA
QVGMLGLLGAIRRYDPSFGRSFEAFAVPTIIGEIKRFLRDKTWAIHVPRRIKELGPRIKA
TVEVLTTELQRSPQVWEIAEYLDVEEDDVLEAMEMGKSYQALSMDHSLEADSDGSTVTLF
DVVGQEDDGYEKADQRMLVAEAMNVLSEREKQIIQFTYIEQLSQKEAGDKLGISQMHVSR
LQRKAIKKLQEAILAAGGVS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacagtctcatcctaaccagcctactaaagagcaggtgcttgagtggattgaa
gcttatcaaaagacagaagatgaagaagcccagacaaatttagtgttgaattataagcgt
cttgttgaatccattgcgcgaaaatactctaatggtaaatcttaccacgaagacatcgcg
caagtaggcatgttgggacttttaggagccattaggcgctatgatccttcattcggtcgt
agcttcgaggctttcgccgtgcctacaattatcggcgaaatcaaacgctttttgcgcgat
aaaacttgggcaatccatgttccgcggcgcataaaggaattggggccacgtatcaaagcg
acggtggaagtgctgacaacagagcttcagcgttcaccgcaagtgtgggaaatcgccgaa
tatctggatgttgaagaagacgatgttctggaagcaatggaaatgggcaaaagctatcag
gcactttcaatggaccactctttagaggcggattcagacggcagtacagttacattattt
gacgtagtcggacaagaagatgatggatacgagaaagcggatcagcggatgcttgtagct
gaagcgatgaatgtgctttctgaacgagaaaagcagatcatccaattcacttacatagag
cagctgagccaaaaagaagccggagacaaactcggtatttctcaaatgcatgtttcccgt
ttgcaaagaaaagccattaaaaaacttcaggaagctattctcgcggccggtggggtttcg
tag
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integrated database retrieval system
