Planococcus antarcticus: BBH88_01010
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Entry
BBH88_01010 CDS
T04428
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pana
Planococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pana03400
]
BBH88_01010
DNA repair and recombination proteins [BR:
pana03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBH88_01010
Archaeal homologous recombinant proteins
BBH88_01010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_19
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ANU09015
UniProt:
A0A1C7DC38
LinkDB
All DBs
Position
390933..394025
Genome browser
AA seq
1030 aa
AA seq
DB search
MRPLKLKMTAFGPYKNTEEINFADLQGNQLFVISGSTGSGKTTIFDGICFALYGSASGSD
RSESRILRSDFADDATHTCVEMEFEIHGTVYRILRQMGHVKKGNKSATGERYEFFERIGE
GEKPCVERQMVSEINRRAEEIIGLTQNQFSQIVMLPQGEFRKLLTSETDNKEEILRKIFK
TEPYKLISERLKQKKDEAAKIFEREQHILSSYIQRITSSLPERDSEIFEVLSREHTNINQ
VLAGLEKEADYYKQKINSDEQKYQTVYTLHADKMSAYHEARKWNDRFGELDTKKAQLEQL
KQRQAEYAEKEIALQSAERAGYIAGIESLFHELSTDEMKKKADLKASISQQEQAEQNKLS
AEQVFIAQQALQGERDKLREQIIYLEKLLPAIQELEQKKENLASLEKEAQQSEIHRKQAG
KEFTIQKDEKQQFDEKIAKLEVFLESSDETQQELTAVTEKARLAAEYILLKQQKKQQQAI
QEAKKITFEQVELSYRQLEAQWFADQAHILATQLHDGEACPVCGSVEHPGIDLKIEEQTV
SKEQVEAAKSDFDLVDGEYRNGSAKLFTLQEQLRNKQEELTNLKLDAEQAEEQSRQLEQT
KLQLTEQIKEQQAAKLDLRKWKEQLAICSSKIEELEQKNRGMAEDVQKKQSSYHTAKAVF
ENELAAVPENLRKLSVLKQQLQQSASRKQQLEQSWTSAQEKFQKSKEQLASAAVSIGYSK
DIAEEITKKRTRAQQQFAEALVKSSFDSEAAYQQAKMTEAALTALKKDVLEYNQTRHTLL
QQVNELEELLAAQSRKDLNQAETELAELKGTYEQALVERNRSQDFEKAGLSLIANIHEVI
GKALEAEQTLNRIADLHDMIRGQNGLKISFERYLQIEYLEQIILSANERLKNLSNGQFHL
IRSDRQEARGKQSGLGLDVYDAYTGQTRDVKTMSGGEKFNASLCLALGMADVIQSFQGNV
SIDTMFIDEGFGSLDEESLNKSIETLIDLQKSGRMIGVISHVQELKAAIPAILEVEKSKE
GYSRTKFLIK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctttaaagctgaaaatgactgcattcggcccttataaaaacaccgaagaaatt
aattttgctgacttacaaggaaatcagttgttcgttatttcaggtagcaccggttcgggg
aagaccactatttttgatggcatctgctttgctctgtatggctcagctagtggctctgac
cgcagtgaatcacggatattaagaagtgattttgcggatgatgcaacgcatacttgcgtt
gaaatggaattcgaaatccatggcacagtgtaccggattttacgccagatgggacacgtg
aaaaaaggaaataaaagtgccactggcgaacgctacgagttttttgaacgtatcggggaa
ggtgaaaagccttgtgttgaacggcagatggtttcggaaatcaatcggcgtgccgaagag
attatcggattgacacaaaatcagtttagccaaatcgtcatgcttccacaaggtgaattc
cgcaagctgctgacttctgaaacagataacaaagaagaaattcttcgtaaaatcttcaaa
acggagccgtataaactgatcagtgagcggcttaagcaaaaaaaagacgaggcagccaaa
atctttgagcgtgaacagcatatcctgagtagttatatccaacggattacttcttctttg
ccggaacgcgattcggaaatttttgaagtattgagccgtgagcatacgaacatcaatcag
gtgcttgccggactagaaaaagaggccgactattacaaacaaaagatcaatagcgatgaa
caaaaataccagactgtctacacccttcatgctgacaaaatgagcgcttaccacgaagca
agaaaatggaatgaccgctttggcgaattggatacgaaaaaagcgcagctcgaacagttg
aaacagcggcaggcagaatatgcagaaaaagaaatagctttgcaatcagcggaacgcgcc
ggctatattgctggtattgaaagcttattccatgaattgagcaccgatgaaatgaagaaa
aaagcggatctaaaagcttcaatcagccagcaagagcaggcagagcaaaacaagctttct
gctgaacaggtgtttattgcgcaacaggcgcttcaaggcgaacgggacaagctgcgtgag
cagatcatttatctggaaaagctattgccagccattcaagagctggagcagaaaaaagaa
aatctagccagtcttgagaaagaggcgcagcagtcggaaatccatcggaagcaagctgga
aaagagtttactattcaaaaagatgagaagcaacagtttgatgaaaaaatcgccaaattg
gaagtttttctggaatcatctgatgaaacgcagcaagaactaacggctgtcacagagaaa
gctagactagcagctgagtatattttgctgaaacagcaaaaaaagcagcaacaagctatt
caagaagcaaaaaagataacttttgaacaagtagaactttcttatcgccaactggaagct
cagtggtttgccgatcaagcgcatattctagccactcaattgcatgatggggaagcctgc
ccagtctgtggaagcgtggaacatcctggcatagacctgaaaatagaagaacaaactgta
tcaaaagagcaagtggaagcagcaaaatccgattttgacttagtggacggagaataccgc
aatggatcagctaaactattcactttgcaggagcaactgagaaataaacaggaagaacta
acaaacctgaaattggatgcggagcaggcagaagagcagtcgcgtcagctggaacaaaca
aagcttcagttaacagagcaaataaaagagcagcaggcagctaagttggatttgcggaaa
tggaaagaacaattagctatttgttccagtaagattgaggaattagagcaaaaaaatcgt
gggatggcggaagatgtgcagaaaaagcagtcttcttatcataccgccaaagcagttttt
gaaaacgaactggctgcggttccagaaaatttacgaaagctttctgtcttgaaacagcag
ttgcagcaatcggcttcgcgcaagcagcagttggaacaaagctggactagcgctcaagaa
aagtttcaaaaatcgaaagagcaactggcgagtgccgcggtttccatcggatattccaaa
gatatagcagaagaaataacaaaaaaaagaacaagagctcagcagcaatttgcggaagcc
ctggtaaaatcgtcatttgattctgaagcagcttatcagcaggcaaaaatgacagaagcc
gcgctcacagctttgaaaaaagatgtcttggagtataaccaaacccgccatactttgctg
cagcaggtcaacgagctggaagaattgctggcagctcaaagccgcaaggacctgaaccag
gctgaaacagaactggcagaactaaaaggtacttacgagcaggcacttgttgaacgcaat
cgctcacaggatttcgaaaaggctggattgagcttgattgccaatattcatgaggtaatt
ggaaaagcacttgaagctgagcaaacactaaaccggattgcagatcttcatgacatgatc
cgtggacagaacggtttgaagatttcttttgaacgctatctgcaaatcgaatatttggaa
cagattatcctatcagccaacgaacggctgaaaaatttatccaatggtcaatttcacttg
atccgtagtgaccgtcaggaagcgcggggcaaacaaagcgggcttggcttggacgtctat
gacgcgtatacggggcagacacgtgatgtaaagaccatgtcaggtggggagaagttcaac
gcatcgctgtgtttagcattgggaatggcggacgttattcaaagcttccaaggaaatgtc
tccattgatacaatgttcatcgacgaagggttcggttcgcttgacgaagaatcgctcaat
aaatcgattgaaacgctgattgacctgcaaaaatcaggacgaatgattggggtcatttca
cacgttcaggaattgaaagccgcaattccagctatcttggaagtcgaaaaatcaaaagag
ggctacagccgtacgaagtttctcatcaaataa
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