Planococcus antarcticus: BBH88_02255
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Entry
BBH88_02255 CDS
T04428
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pana
Planococcus antarcticus
Pathway
pana03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBH88_02255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pana03021
]
BBH88_02255
03400 DNA repair and recombination proteins [BR:
pana03400
]
BBH88_02255
Enzymes [BR:
pana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBH88_02255
Transcription machinery [BR:
pana03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBH88_02255
DNA repair and recombination proteins [BR:
pana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBH88_02255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Dockerin_1
DUF961
Motif
Other DBs
NCBI-ProteinID:
ANU09229
UniProt:
A0A1C7DCJ7
LinkDB
All DBs
Position
159207..160151
Genome browser
AA seq
314 aa
AA seq
DB search
MLEIEKPKIETVEIDSNAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVEEDVATIILNIKKLALKIYSDEEKVIEIDVKGDGTVTAADITHDSDVEI
LNPDLYIGTIAKNGHLRMRMYANRGRGYARADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQLAHFDKLSLDVWTDGSIGPKEAIALGAKIFTEHLNIFVGLTDEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVHELASKSEDDMMKVRNLGRKSLEEVK
VKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaatagaaaaaccaaagattgaaacggttgagatcgacagcaatgccaaattt
ggtaaatttgttgttgaacctcttgagcgtggatatggaaccactttaggaaactcctta
cgtcgaatcttactttcatctttacctggcgcagctgttacttctattcaaattgatggc
gttctgcatgaattctccactgttgaaggtgtagaagaagatgtagcaaccatcattctg
aatatcaagaagctggctttgaaaatttactctgacgaagaaaaagtcattgaaattgat
gtaaaaggtgatggaacggttacggctgcagatatcacgcacgacagtgacgtggaaatt
ctgaatccggatctatatattggaacaattgctaaaaatggccatttgcgtatgcgcatg
tatgcgaacagaggccgtggatatgcccgtgcagatcagaacaaacgtgaagatcttccg
atcggcgttatcccgattgactctatttacactccagtttcacgtgttaacttccaagta
gaaaacactcgtgtgggtcaactggctcatttcgacaaattatctcttgatgtttggaca
gatggcagcattggtccaaaagaggcaattgcacttggagcaaagatttttactgagcat
ttaaatatcttcgtaggattaacagatgaggcacaaacggctgaaatcatggttgaaaaa
gaagaagaccagaaagaaaaagtattagagatgactatcgaagaacttgatctttcggtt
cgatcttacaactgcttaaaacgtgcgggtatcaacacggtacacgaactggcaagcaag
tcggaagacgacatgatgaaagtacgcaacctcggacgcaaatcacttgaagaagttaaa
gtgaagttggaagatttaggacttggccttcgtaaagaagactga
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