Planococcus antarcticus: BBH88_06175
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Entry
BBH88_06175 CDS
T04428
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pana
Planococcus antarcticus
Pathway
pana03420
Nucleotide excision repair
pana03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBH88_06175
03430 Mismatch repair
BBH88_06175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pana03400
]
BBH88_06175
Enzymes [BR:
pana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBH88_06175
DNA repair and recombination proteins [BR:
pana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBH88_06175
MMR (mismatch excision repair)
Other MMR factors
BBH88_06175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANU09913
LinkDB
All DBs
Position
complement(3118846..3120972)
Genome browser
AA seq
708 aa
AA seq
DB search
MSQFFERKKQELGVQLNKIQRKAVERTEGPLLLLACPGSGKTTTMIMRIGYLIEEKGVLP
KRIKAITFSKASANDMLQRYKRFFPSLQPVDFSTIHSLAFQITRDYFSGSPYVMIEGSET
NGLHKKKLLREIYRTENDEPITDDQLEELISFISFVKNKMSPRKQWAKLKEPFPGAIEIL
KTYEAFKENYDVRLVDFDDMLSLAYEALEKDGKLLAKYQERWDYVMTDESQDTSLIQHAI
VEKLVASHQNLCVVADDDQSIYTWRAAEPTYLLKFRTVYPDAYIMKMERNYRSSQNIVHT
ANEFIKTNKKRHDKNMFTKQPEGDPIVLKRLSSEEAQFKYVMKELKELTDYGDVAILYRN
NSSSTLLMSELERLGIPFYMKDSDNRFFSHWIVEDMLNFMRFSLKPERIDIYSKVASKTN
AYWSGSQLKMLSRMNPTGEHAFDKINLTITLKDYQIKILAEQKKWFQALNSMKPLKVIRT
IRGEMGYDQMLASRAEKFGMKMTYLAQILATLEQIAEPLESMTAFAKRLKQLEQVTQQAK
KEKTDDMLTLSTFHSSKGLEFERVYMLDLVEGVIPTEEDAETPDTLEEARRLFYVGMTRA
KSHLELISYGNESRFANEVRNLIAPEKSQTKPQRTAAKTPIKVKVPNNPNAIDSEEALHE
GVQVRHRVFGTGEIVERDKERISIQFAKERKDLMIDICLSYRLLEIIE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagccaattctttgaaagaaaaaagcaggaacttggagttcagctaaataaaatacag
cgaaaagcggtagaacgcacagaaggccctctactgttgctagcttgccccggatccgga
aaaacaacgacaatgattatgcgcatcggttacctgattgaggagaaaggtgtgctgccg
aagcgaatcaaagcaatcacgttcagcaaagcatccgccaacgacatgcttcagcgctat
aagcgattcttcccttctctacagccagtcgatttttcaaccattcatagcttagctttc
cagattacgcgcgattatttttcgggatcgccttacgtcatgatagaaggcagtgagaca
aatggtctccacaagaaaaagctgcttcgggaaatataccgaacggaaaacgatgagccg
attacggatgatcaattagaggaattgatttcattcatcagttttgtcaaaaacaaaatg
tcgccacgaaaacaatgggccaaactgaaggagccgtttccgggtgcgatcgaaattttg
aaaacttacgaagctttcaaagagaactatgacgtaagattagttgattttgacgacatg
ctgtcactggcttacgaggcgctggagaaagacggaaaattgttagcaaagtaccaggaa
cgctgggattacgtcatgacagacgagagtcaggacacgtcgctgattcagcatgccatt
gtggaaaagctggtggccagccaccaaaatctttgcgttgtagctgacgacgatcagtct
atttatacgtggagagctgctgaaccaacttatttgttaaagtttagaaccgtttatcca
gacgcctatatcatgaaaatggaacgcaattaccgctcttctcaaaacattgttcacaca
gctaacgaatttatcaaaaccaataaaaaacggcatgacaaaaatatgttcaccaagcaa
ccagaaggcgatccaattgttttaaaacgcttgagctcagaagaagcgcagtttaaatac
gtcatgaaagagctcaaggaattgactgattatggcgatgtagccattttgtaccgcaat
aattcgtcttcaactttattgatgagtgagcttgagcgtctaggcattcccttctatatg
aaagattccgataatcgctttttctctcattggattgtagaagacatgttaaattttatg
cgtttcagcttgaagcccgaacgcattgatatatattcgaaagttgcttccaaaaccaat
gcctattggtcaggcagtcaattaaaaatgctcagtcgcatgaatccgaccggtgaacat
gcttttgataaaattaatttaacgatcacgttaaaagactatcaaataaaaattttagct
gaacagaaaaagtggttccaagcattaaacagcatgaaaccattgaaagtcatccggacg
atccgaggagaaatgggctatgaccaaatgcttgcgagccgcgcagagaaattcggcatg
aaaatgacctacttggcacagattttagcaacattggaacaaattgcggaaccgcttgaa
tctatgacagctttcgcaaaacgcctgaaacagctggaacaagtaacacaacaagcaaag
aaagaaaaaaccgatgacatgttgactttatcgacattccacagctctaaaggtctggaa
tttgaacgggtttatatgcttgatttggtagaaggtgttattccaactgaagaagatgcg
gaaactccagatactttggaagaagcgcgccgcttgttctatgtcggaatgacaagagcg
aaaagccatttggagctgatcagctatggcaatgaatctcgctttgcgaatgaagtgcgc
aatctgattgctcctgaaaaaagtcagaccaaaccgcaacggactgcggctaaaacaccc
atcaaagtaaaggtaccgaataatccaaatgccatcgattcggaggaggcattgcacgaa
ggggttcaggtccgccaccgggtttttggtacaggagaaattgttgagcgagacaaggaa
cggatttccattcaattcgcaaaagaacggaaagacttgatgattgatatttgtttgagt
tatagattactggagattatcgagtag
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