Planococcus antarcticus: BBH88_08245
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Entry
BBH88_08245 CDS
T04428
Name
(GenBank) transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
pana
Planococcus antarcticus
Pathway
pana02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBH88_08245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pana03000
]
BBH88_08245
Transcription factors [BR:
pana03000
]
Prokaryotic type
Helix-turn-helix
Other families
BBH88_08245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
HTH_3
SPO22
TPR_NPHP3
HTH_31
HTH_19
TPR_MalT
TPR_11
SduA_C
TPR_INTS8_3
Motif
Other DBs
NCBI-ProteinID:
ANU10292
UniProt:
A0ABM6D506
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All DBs
Position
2652056..2653351
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AA seq
431 aa
AA seq
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METGMRLKYHRSKQKISLEEVASGILSPRELKKMENGSKDPALKDLEALCKKLTIPLAPK
DNPIGKVLVKNFKNSLLHPQNKAKIMEQYTDIQGHPLLHADEDVELEYSIQQIRYFIIIG
DLDSAEEKIKEMERFREFMNQEQFYLFHKYNGNYNYILNDFEKALKTYLVAEKIAPNTIS
ASELGDLYYSIGISSTKCRETEMAFKYSEMALKIYQQEFIPKRIVECHLNIAITHQHFGN
FRMSMEHYKNALTIGNKLEIDILRFTTEFNLGYSYFIYQNYNLSVVHIENSLKYIHPEYT
ADLLSSYCILIKCQYELNNFDAAKVWIRKGLEIVENKKLNIHSPTNHIFKEAYIEFICLV
HLLDENYEDFENYVLRKLIPSLEATGNYFESGYYFGHLGQIFYEQERYKESAEIMNKARE
SYKNINILFRE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgggaatgcgtttaaaatatcatcgttcgaaacagaaaatcagtttggaagaa
gtcgcctctggcatactatctcccagagaacttaaaaaaatggaaaatggcagtaaagat
cccgctttaaaagacttagaagctttatgcaagaaactaactatacctttagcacctaaa
gataatccaataggaaaggtgcttgtaaaaaactttaaaaattcactactccacccgcag
aacaaagctaaaatcatggaacagtataccgatatccaagggcaccccttattgcatgca
gacgaagatgtggaactggagtatagtattcagcagattaggtattttattatcatcgga
gatttggatagtgccgaagagaagattaaagaaatggaacgtttcagagagtttatgaat
caagagcagttctatttatttcataaatacaacggaaactacaattacattctcaacgat
tttgaaaaagctctcaaaacttaccttgtcgctgaaaaaatagcgcctaatacaatttct
gcttcagaacttggcgatctttattactcaattggaatttccagcaccaaatgcagagaa
acagaaatggcttttaagtattccgaaatggcgttgaagatttatcagcaagagttcata
ccaaagcgtatagtagaatgtcatttaaatatagcaatcactcaccaacatttcggtaat
ttcaggatgtcgatggagcattacaaaaatgctttgacaataggcaataaactagagatt
gatattctgcgttttacgacagaatttaatctagggtattcttactttatataccaaaat
tacaatctttcagttgttcacattgaaaattcattaaaatatattcacccagaatataca
gcagaccttttatcaagttattgcattttaattaaatgtcaatatgagttaaacaacttt
gacgctgcaaaagtatggattcgtaaaggcttagaaatagtggaaaataagaaattaaat
atccattctccgactaaccacatatttaaagaagcttacattgaatttatttgcttggta
cacctcttggacgaaaactatgaagatttcgaaaactatgttctaagaaaattaattcct
agtcttgaggctacaggcaattacttcgaaagcggctattatttcggacatttagggcaa
atattttatgagcaagaacgttataaagagtcagctgaaatcatgaacaaagcaagagaa
tcatataagaatattaatattttatttagggagtga
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