Planococcus antarcticus: BBH88_08605
Help
Entry
BBH88_08605 CDS
T04428
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pana
Planococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pana03009
]
BBH88_08605
Enzymes [BR:
pana01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BBH88_08605
Ribosome biogenesis [BR:
pana03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BBH88_08605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
YpuD_C
Ub-Mut7C
Motif
Other DBs
NCBI-ProteinID:
ANU12192
UniProt:
A0ABM6D9R5
LinkDB
All DBs
Position
complement(2573341..2574216)
Genome browser
AA seq
291 aa
AA seq
DB search
MKPFQLTYTAEAPNLLREALGEWGISKRTLASVKYGGGQILVNGTEVTVRHALEKGDAVT
VIFPNEEHGKGLVAEEGDLKIVYEDAALLIVEKPPFQNTIPSREHPFGSLANIVAKHFND
HGIPSTLHIATRLDRDTSGLVCIAKNRHIHHMISLQQQEKKMKRRYEALVHGLIDKDEFT
ITAPIGRKNTSIIEREVREGGQFAETEVRVLQRLEGYSHIILQLNTGRTHQIRVHMTHIG
YPLLGDDLYGGKRDLLGRQALHCSKLELIHPVSGDPLFFSSSLNKDMQSLV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccttccaactgacgtatactgctgaagctccgaacttgttgcgcgaggcactc
ggggagtggggcatttccaaacgaacactggcttccgtcaagtacggcggcggacagatt
ttagtgaatggcacagaagtaacggtcaggcatgccttggaaaaaggcgatgctgtgacc
gttatttttccgaatgaagagcatggaaaagggctggttgcagaagagggtgacttgaaa
attgtctatgaagatgcggccctgttaatcgttgaaaagccgcctttccaaaataccatt
ccatcgcgagagcatccgtttggcagcttggccaatattgtcgccaagcatttcaacgac
cacggcattccttctactttgcatatcgcgaccaggcttgaccgtgacacttctggactt
gtctgcatcgcaaaaaaccgccatattcatcatatgatctcgctgcagcaacaggaaaaa
aagatgaagcggcggtacgaggcactggttcatggactgatagacaaagatgaatttacg
ataactgctcccatcggacgaaagaatacgagcatcatcgaacgggaagtccgtgaaggc
gggcaatttgctgaaaccgaagtccgtgtactacagagactagaaggctactcacatatc
atcctgcaattgaatactggcagaacccatcagatacgcgttcatatgacccatatcggc
tatccgctgttaggtgacgatctgtatggcggcaaaagagacctgttgggacgtcaggcg
cttcattgttcgaaattggaattgatccatccagtttcaggagatccactgttttttagt
tcttcgttgaataaagacatgcagtcattggtttaa
DBGET
integrated database retrieval system
