Planococcus antarcticus: BBH88_08745
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Entry
BBH88_08745 CDS
T04428
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
pana
Planococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pana03021
]
BBH88_08745
Transcription machinery [BR:
pana03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBH88_08745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
HTH_16
APAF1_C
DUF3577
Motif
Other DBs
NCBI-ProteinID:
ANU12194
LinkDB
All DBs
Position
complement(2541133..2541819)
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AA seq
228 aa
AA seq
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MVLQAQSGDEQALNDLLFSYSPFMKKVASQVCKRFIDDHDDEYSVALSAFNEAVQKFDQI
HNASFLTFAHMVIRRRVIDFIRKESRQAEFSHDFMPAIDPESHNCVADHAASIAYTIKEQ
DKKRREEIYLYEEKLQEYGLSFGTLVKVSPVHQDARKTSIQIAQLVAETDEYKHYLMDKK
KLPIKEIENLVKVSRKTIERNRKYIIAMALLQMSDLHFLKDYLKGWLN
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggtattacaagcacagagcggcgacgaacaagcgctgaacgatttgcttttttcatat
tcaccttttatgaaaaaagtggcatctcaagtatgcaaacgatttatcgatgatcatgac
gatgaatacagtgtcgcgctttctgcattcaatgaagctgtacaaaaatttgatcaaatt
cacaatgcatcgtttctgacttttgcacatatggtcattcgcagacgcgtcattgacttt
atacgcaaggaaagccgtcaggctgaattcagtcacgatttcatgccggcgattgaccca
gaatcacacaactgcgtcgcagatcatgccgcttccattgcctataccataaaggaacaa
gataaaaaaagacgtgaagaaatttacttgtacgaagaaaagcttcaagagtatggctta
tcgttcgggacgctggtcaaagtatcgcctgtccaccaagatgcacgcaagacctccatt
caaattgctcagttagtggctgaaacggatgaatacaagcattacttgatggataagaaa
aagttaccgattaaggaaattgaaaatctggtaaaggtttcccgtaagacaattgaacgc
aatcgaaaatacataattgcaatggcattgttgcaaatgagcgatctgcatttcttaaaa
gattatttgaaggggtggttaaactaa
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