Planococcus antarcticus: BBH88_09700
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Entry
BBH88_09700 CDS
T04428
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pana
Planococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pana03016
]
BBH88_09700
Enzymes [BR:
pana01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBH88_09700
Transfer RNA biogenesis [BR:
pana03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBH88_09700
Prokaryotic type
BBH88_09700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ANU10562
UniProt:
A0A1C7DGM5
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All DBs
Position
complement(2349236..2350165)
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AA seq
309 aa
AA seq
DB search
MALNGILPLWKEKGMTSHDCVFKLRKILQTKKVGHTGTLDPEVDGVLPICIGNTTKVAEY
ITDQGKTYEAEVAIGYSTETEDATGETVDTDISEKVITREQVVEVLLQLTGNIKQIPPMY
SAVKVNGKKLYEYARQGIPVERPERTVRIDSIELLDDDSKWSGECIKFNIRIHCGKGTYI
RTLAVQIGEALGYPAHMSKLTRTESGKFSKKDCVTLAEVAELAQNGDIGDILKPLSYGLS
AFPFMEIESEQIFAVKNGQVLARHAILDKTGFVVLTHQGQPVALYKNHPEKADKMKPEKM
FGFPTVDEV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaacggaattcttccattatggaaagaaaaagggatgacctctcatgattgt
gtctttaaattgaggaaaatcctgcaaacgaaaaaagttgggcataccggaacactggat
cccgaagtggatggggtattgccaatttgtattggaaataccacgaaagtggcagagtac
atcacggatcaaggcaagacctacgaagcagaagtggcaatcggctattcgacggaaaca
gaagatgctacaggggagacggttgataccgatatttcggaaaaagtgattacacgtgag
caagtggtagaagttttgcttcagttaactggtaacattaaacaaataccacctatgtat
tcggcagtcaaagttaatgggaagaaattatacgaatatgcacggcaagggattcctgtt
gaacgaccagaacgaacagtccgtattgattcgatcgaattgctagatgacgattcgaag
tggtctggggagtgcattaagttcaatattcgcatacactgcggtaaaggaacatatatc
cggacactagctgtacaaattggtgaagcgctaggttatcctgctcatatgtcgaaattg
acacgaacagaatctgggaaattcagcaaaaaagattgtgtaacacttgctgaagtggca
gaacttgctcaaaatggagatattggtgacattttgaaaccgcttagctacggcttaagt
gcgtttcctttcatggaaattgaatcggaacagatttttgctgtgaaaaatggtcaagtg
ttggcgcggcatgccattctcgacaaaacgggctttgtggttttgacgcatcaggggcag
cctgtagcgctttataaaaatcatcccgaaaaagcggacaagatgaaacctgaaaaaatg
ttcggttttccgacagtggacgaggtgtaa
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