Planococcus antarcticus: BBH88_09715
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Entry
BBH88_09715 CDS
T04428
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pana
Planococcus antarcticus
Pathway
pana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBH88_09715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pana03019
]
BBH88_09715
03016 Transfer RNA biogenesis [BR:
pana03016
]
BBH88_09715
Enzymes [BR:
pana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BBH88_09715
Messenger RNA biogenesis [BR:
pana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBH88_09715
Transfer RNA biogenesis [BR:
pana03016
]
Prokaryotic type
tRNA degradation factors
BBH88_09715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_2
OB_RRP5_4th
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
ANU10565
UniProt:
A0A1C7DGH4
LinkDB
All DBs
Position
complement(2345612..2347729)
Genome browser
AA seq
705 aa
AA seq
DB search
MEQTKKVYTLDWAGRELQVEVGQLAKQANGAALIRYGDTAVLSTATASKTPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKATLTSRLIDRPIRPLFPDGFRNEVQVISMVMSV
DQDCPSEMAAMFGSSLALMISDIPFGGPIAGVIVGLIDGQYIINPTNAQLEQSSINLIVA
GTKDAINMVEAGAKEVSEEIILEAIMFGHEEIKKLIAFQEQIAAEVGKEKTDIKLYELDA
ELTSSIKEAVEADLNTAVQINEKQARNEAIDEVKARAMAAYEESEDAVKKQAGQILEKMV
KEEVRRLITDEKIRPDGRGPSEIRPLSSEVGVLNRTHGSGLFTRGQTQAMSICTLGALGD
VQIIDGLGIEDTKRFMHHYNFPLFSVGETGFLRGPGRREIGHGALGERALEAVIPNEKDF
PYTIRLVAEVLESNGSTSQASICASTLAMMDAGVPLSAPVAGIAMGLVKKGENYTVLSDI
QGMEDYLGDMDFKVAGTAKGITALQMDIKIDGLSREILEEALAQAQIGRIHILESMLATI
AGPRTTLSKYAPKIIMVKINPDKIRDVIGPGGKVINKIIDETGVKIDTEQNGTIFISSVD
EEMNAKAKAMIENIVREAKVGEYYEGKVKRIEKFGAFVELFTGKDGLLHISEIQEERTKE
VEDVLKMDQVVQVKVIEIDRQGRVNLSRKIVLKEQKEVAEKQQQE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacaaaaaaagtctacacacttgattgggcaggccgcgaattgcaagttgag
gtcggtcaattggcaaagcaagcaaacggagcagcattgatccgttatggtgatacagca
gttctatctactgcaaccgcatcaaaaactccgaaacctttagatttcttcccattgact
gtcaactacgaagaacgtctatacgctgtcggtaaaattccaggcggttttatcaaacgt
gaaggacgtccatctgaaaaagcgacgttaacaagccgtttgatcgaccgtccaatccgt
cccctattcccggatggtttccgtaatgaagttcaagttatttcaatggttatgtccgtg
gatcaggattgcccatcagagatggccgcaatgtttggttcttcattagccttaatgatt
tcggatatccctttcggcggaccgattgctggagtaattgtcggtttaatcgacggacag
tatatcatcaacccaacaaatgcacagcttgaacaaagctcaatcaacttgatcgtagcg
ggaacaaaagatgccatcaacatggtcgaagcaggagcgaaagaagtttctgaagaaatc
attttagaagctattatgttcggtcacgaagaaatcaagaaattgatcgctttccaagaa
cagattgctgcagaagttggtaaagaaaaaacagatatcaaactgtatgaattagatgca
gaattgacgtcttctattaaagaagctgtagaagctgacttgaatactgctgttcaaatc
aacgaaaaacaagcacgcaatgaagccattgacgaagttaaagcacgtgctatggctgca
tacgaagaatcagaggacgcagttaaaaaacaagcgggccagattcttgaaaaaatggtc
aaagaagaagtacgccgtctaattacggacgaaaaaatccgtccggatggccgtggacct
tctgaaatccgtccattgtcttctgaagtcggcgttcttaaccgcacacacggttctgga
ctgtttactcgtggtcaaacgcaagcgatgagtatttgtacacttggtgcattaggtgat
gttcaaattattgacggccttggcattgaagatacaaaacgttttatgcaccattacaac
ttcccattgttctcagtgggtgaaactggattccttcgtggacctggacgccgtgaaatc
ggtcacggagcactcggagaacgtgcactagaagctgttattccaaacgaaaaagacttc
ccttacacaatccgtttagttgcagaagtactagaatcgaacggttcaacttcacaagca
agtatttgtgcgtcgacgcttgcgatgatggacgccggtgttcctttatccgctccggta
gcaggtattgcaatgggtcttgttaaaaaaggcgaaaactatacagtgttatcggatatt
caaggaatggaagattaccttggtgatatggactttaaagtagctggtacagctaaaggc
attaccgctcttcaaatggacattaaaatcgacggtctttcccgtgagatcctagaagag
gcattggcgcaagctcaaatcggccgtatccacattcttgaatcaatgcttgcgacaatc
gctggaccgagaacgactctttctaaatacgcaccgaaaattattatggttaagatcaac
cctgacaagattcgtgatgttatcggacctggcggcaaagtgatcaataaaatcatcgat
gaaacgggcgttaagattgatacagaacaaaatgggacaattttcatttcatctgttgac
gaagaaatgaatgcgaaagcgaaagcgatgattgaaaacatcgtgcgtgaagcaaaagtt
ggcgaatattatgaaggcaaagtgaagcgaatcgagaagtttggcgcattcgttgaattg
ttcactggcaaagacggtcttcttcatatttctgaaatccaagaagaacggacgaaagaa
gtagaagacgtcttgaaaatggatcaagtcgttcaagtcaaagtaattgaaatcgaccgt
caaggccgtgtaaacttatcacgtaagattgttttgaaagaacaaaaagaagtagctgaa
aaacaacaacaagaataa
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