Planococcus antarcticus: BBH88_13010
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Entry
BBH88_13010 CDS
T04428
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pana
Planococcus antarcticus
Pathway
pana03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BBH88_13010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pana03400
]
BBH88_13010
Enzymes [BR:
pana01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BBH88_13010
DNA repair and recombination proteins [BR:
pana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BBH88_13010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ANU11150
UniProt:
A0ABM6D656
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All DBs
Position
1695941..1697290
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AA seq
449 aa
AA seq
DB search
MSTDPYLSVKALTKYIKKKFDADPHLRDVYVKGELSNVKIHTSGHIYFTLKDNVARLPGV
MFSASAKSVKFKPESGMTVLIRGDVSVYEASGQYQLYAQSMQSDGIGDYYLAFEQLKEKL
AKEGLFNASHKKELPRFPKRIAVVTAQTGAAVRDIIITLYRRYPLADVVLFPTLVQGTGA
TQSIVKSIQAANKGEFDVLIVGRGGGSIEDLWAFNEEAVARVIFDSRIPVISAIGHETDT
TIADFVSDLRAPTPTAAAELAVPSQAELLERVSNYRSRMYRVVSGTVNQQKQALNRYTSS
LPLSYPERLYRPFIERVERATESLQRESLQHLKRSQERYRTLDQQLKSRVPLQRIRQSET
EVAELSRRLDYQLDQLLKSRSQQLSSAIRTLDALSPLKIMDRGYSIPYVEGAVVKSVSQV
KAGDRLTIAMKDGTVQTIVNEINPANGGD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaccgacccgtacttaagtgtcaaagcgttaaccaaatacataaagaagaaattt
gatgccgatccccacctccgcgacgtctatgtcaaaggtgagctgtcgaatgtcaaaatc
cataccagtggccatatttatttcacattgaaggacaatgtcgcacgtttgccgggcgtc
atgttttcggcaagcgctaaatccgttaaattcaagccggaaagtggtatgactgtgcta
atccgcggggatgtctcggtctatgaagcgtccggccaataccaattgtatgcacagtcc
atgcagtctgatggcatcggtgattactatctggcatttgaacaattaaaagaaaagttg
gctaaagaagggttgttcaatgcttcccataaaaaggaactgccgcgttttccgaaaaga
atagcggtggtcactgcccagacaggtgcggcagtacgcgacatcatcatcacgctctat
cgtcgttatccgttagcagacgttgtgctgtttccaacgcttgtgcaaggaaccggggcg
acgcaatctatagtcaagtccatccaggcggccaataaaggcgaatttgatgtgttgatt
gttggacgagggggtggctcgattgaagacttatgggctttcaatgaagaagcggtagcg
cgtgtcatctttgattcgcggatcccagtcatttctgctattggccatgaaaccgatacc
actatcgctgatttcgtttcagatcttcgggcaccaacaccgacagctgctgcggaattg
gctgtaccaagccaagcagagctgctagaacgtgtttcaaattatcgcagccgcatgtac
cgggttgtttcgggaaccgtcaatcagcaaaagcaagccttgaatcgatacacctcatcg
ttgccgctgtcctatccggagcgtttataccgtccgtttatcgagcgtgttgagcgcgcc
accgagtcgctgcagcgggaatcactgcaacacttaaaacgttcacaagaacggtaccgg
acgctggatcagcaactgaaatcacgcgtgccgctccagcggatacgccaatccgaaaca
gaagtggcagagctgtcaagaaggctcgattatcagctggatcaattgctgaagagtcgc
tcgcagcaattgtcgtcagcaattcgaacgcttgatgcgctgagtccacttaaaatcatg
gaccggggttattcgatcccatatgtagaaggagccgtcgttaaaagtgtatcgcaagtg
aaagcaggcgatcgactgactatcgcgatgaaagacggtaccgtccaaacaattgtcaat
gaaataaatccagcaaatggaggagactga
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