Planococcus antarcticus: BBH88_13685
Help
Entry
BBH88_13685 CDS
T04428
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pana
Planococcus antarcticus
Pathway
pana03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBH88_13685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pana03400
]
BBH88_13685
Enzymes [BR:
pana01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BBH88_13685
DNA repair and recombination proteins [BR:
pana03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBH88_13685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
AAA_22
AAA_16
AAA_28
UvrD-helicase
nSTAND3
AAA
TsaE
AAA_25
NPHP3_N
AAA_18
NTPase_1
NACHT
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ANU11272
UniProt:
A0ABM6D6V7
LinkDB
All DBs
Position
1560185..1562602
Genome browser
AA seq
805 aa
AA seq
DB search
MTGQIDLFQEEKQFVLGRPVVSIFHNPRNLFSIAKVKIQETNTPYTEKEIIVSGYFPMLS
LEEQYRFTGVVKNHPRYGVQFQVETFSKEVPETEQGIIHYLSSDMFNGIGRKTAETIVKK
LGKEAIKKILEDPDALDKVPRLSDDKKDTIRATLQMNLGLERVMIQLNDWGFGPQVGMRI
YQAYREETIDILTKNPFKLIEEIEGIGFQRADELGTKLGITGSHPDRIKAAILHILNQAS
LSDGHVYVDAKTLIPLVKEMLEARQQGEIAIEAISKAAIELGEEGKVAGEETRLYLPSLY
YSEVGIATKLETLLAAQENRTKFPSSEVRKALGEAEERLGVNYAETQVDAIENSINSSVM
ILTGGPGTGKTTVVRGLVEIYAELHGLSLDPKEYAKKKEPFPIILAAPTGRAAKRLSEST
DLPAMTIHRLLGFNGQEKDEETEKEIEGKLIIIDEMSMVDTWLAHQLLKAVPEDAQLIFV
GDQDQLPPVGPGQVLRDLLESKRIPTVELTDIYRQSSGSSIIELAHQMKNGQLPNDITAK
TADRSFIKAGIEQIPSVVEKVVKSALSKGHSIKDIQVLAPMYKGPAGIDVLNRLIQEMVN
PNPDGKRKELVFGDITYRIGDKILQLVNQPESNVFNGDMGEVVAIMKAKETVEKQDMLVA
SFDGIEVTYERSDLNQLTLAYCCSIHKSQGSEFSTVIMPVVRGYMKMLRRNLLYTGITRS
KDFLILCGDPSVFRYGVERTDDAQRMTTLKNRLAVAAEEPKTEQQTMLKAEEKQSKPISL
TTENVHAIHPMIGMEGITPQKFIEA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacaaatcgacttatttcaagaagaaaagcagtttgtattagggcgtcctgtc
gtctcgatttttcacaatccccgaaatttattctccattgccaaagtgaaaattcaagaa
accaataccccatataccgaaaaagaaatcattgtgtctggctattttccaatgctatcg
ctcgaagaacagtatcgttttaccggcgtagtgaaaaatcatccgcgttatggtgttcaa
tttcaagtggaaaccttctccaaagaagtaccagaaactgagcaagggattatccattat
ttgtcaagtgacatgtttaatggcattggtcggaaaacggcggaaacaatcgtcaaaaaa
ctcggcaaagaagctattaaaaaaattctggaagacccggatgcacttgataaggtgccg
cgtttgtctgatgataaaaaagacaccatccgtgcgactttgcagatgaaccttggtctt
gagcgtgtcatgatccaactcaacgactggggctttggcccgcaagtcggcatgcggata
taccaagcttaccgcgaagaaacgattgatattctaacaaaaaatccgttcaaacttatt
gaagaaattgaaggaatcggttttcaacgtgctgatgaactcggaacaaaactcggcatc
accggcagtcatccggatcgtatcaaagcggcgattttgcatattctcaaccaagcttcc
ctgtctgatggtcatgtctatgtggacgctaaaaccttgattccattagttaaagaaatg
ctcgaagcacgccaacaaggtgaaattgcgattgaagcaatttcgaaagccgctatcgaa
ttgggtgaagaaggtaaagtcgcaggtgaagaaacgcggctttatttgccatcgctatat
tattcagaagtcgggattgcgacaaagctggaaactttgcttgccgcacaagaaaatcgc
acgaaatttccaagttcagaagtccgcaaagcgctcggggaagcggaagaacgtcttggg
gtcaattacgcagaaacgcaagttgacgcaattgaaaacagtatcaattcatcggtcatg
attttaacgggtggaccaggtactggtaagacgacggtcgttcgtggattggtagaaatc
tatgcagaactgcacggtttgtcactcgatccaaaagaatacgccaagaaaaaagaacca
tttccaattattttggcagcacctacgggacgtgcagctaaacgtttaagtgaatcaacc
gatttaccggcgatgacgattcatcgtttactaggctttaacggacaagaaaaagatgaa
gaaaccgaaaaagaaatcgaaggtaaattgattattatcgatgaaatgtcaatggttgac
acttggcttgcccatcaattgctaaaggccgtaccagaagatgctcaactaattttcgtc
ggagaccaagaccaattaccaccggtcgggccgggacaagtactaagagacctactcgaa
tcaaaacggattccaactgtagaactgaccgatatttaccggcagtcgtcaggctcttca
attattgaacttgcccatcaaatgaaaaacggtcaattgccaaatgacattactgcaaaa
acagcagaccgctctttcatcaaagcaggaattgaacagattccatctgtcgttgaaaaa
gtggttaaaagcgccttgtcaaaaggccattccatcaaagatattcaagttctagcgcct
atgtacaaaggaccagcaggcattgatgttttgaatcggttgattcaggagatggtcaat
cccaatccagacggcaaacgcaaagaactggtattcggtgacatcacctatcgtatcggt
gacaagatcctccagcttgtcaatcagccggaaagcaatgtcttcaatggcgatatgggc
gaagtcgtcgcaattatgaaagcaaaagaaactgtcgaaaagcaagatatgctagtggct
tcttttgatggcatcgaagtgacttacgaacgcagcgacttgaatcaactgacgctagcg
tactgctgctcgattcataaatcacagggctctgaattctcaacggtcattatgccagta
gttcgaggctatatgaaaatgctgcgccgcaatttgctttataccggcatcacacgcagc
aaagattttctcatcctatgtggcgacccgagcgttttccgctatggtgttgaacgcacg
gacgacgcgcagcggatgaccactttgaaaaaccgtttggcagttgcagcggaagaaccg
aaaaccgaacaacaaaccatgctaaaagcagaagaaaaacaaagtaaacctatcagccta
accaccgaaaacgtccatgccatccacccaatgatcggcatggaaggcatcaccccacag
aaatttatagaagcttga
DBGET
integrated database retrieval system
