Planococcus antarcticus: BBH88_15835
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Entry
BBH88_15835 CDS
T04428
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pana
Planococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pana03019
]
BBH88_15835
Messenger RNA biogenesis [BR:
pana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBH88_15835
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ANU11641
UniProt:
A0A1C7DK45
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Position
1138254..1139192
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AA seq
312 aa
AA seq
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MTKGITHRAVGETVDEFLLIKQSIKGVTTTGNPFISLVLQDKSGDIEAKLWDTKDEQEKI
FAAETIVRVGGEIHNYRGKNQLRIKSIRPAKPEENQSISDLMPSSEKSTDELLEEVMKYL
FEMENPQIQRITRFMLKKYQQQFLTYPAATRNHHDYVSGLADHVVSMLKLGKALVDIYPG
LNKDLLFAGIILHDIGKVIELSGPIATTYTVEGNLIGHISIMVTEVAKAAEELEIEGEEV
LLLQHIILSHHGKEEWGSPKKPMLKEAEILHYIDNIDAKMMMLDRVLGKTKEGEFSERVF
ALDNRSFYKPKI
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaggaattacacaccgtgcagttggagagaccgtcgatgagttcttgctaatt
aagcaatcaatcaaaggagtcaccactactggaaacccatttatttcgttagtattgcag
gacaaaagcggcgatatcgaagcgaaattatgggatacaaaagatgaacaggaaaagata
ttcgcagcggaaacaatcgtccgtgtcggtggcgagattcataactacagagggaaaaac
caattgcgtatcaaaagcatacgaccggcaaaacctgaggaaaaccagtcgatttcagac
ttgatgccatcgtcggaaaaatcaacagatgaattactggaagaagtaatgaagtatttg
tttgaaatggagaatcctcaaattcagcgaattacgcgttttatgctgaaaaagtaccaa
cagcaatttttgacatatccagcagcaacgcgcaaccatcacgattacgtttccggttta
gcggatcatgttgtttctatgttgaagttgggtaaggcattagtcgacatttatccaggt
ttgaacaaagatttgctatttgccggaattattttgcatgacatcggcaaagtcatcgag
ctttccggtccgattgccactacttatacagtggaaggcaatttgatcggccatatttcc
atcatggtgacggaagtggccaaagctgcggaagagctagagattgaaggggaagaagtg
ctgttattgcagcacattattctttctcatcacggcaaggaagagtggggaagtccaaaa
aaaccgatgctcaaagaagcggaaattctgcactatatcgataatattgatgccaagatg
atgatgttggaccgtgtccttggaaaaaccaaagaaggcgaattctctgaacgcgtcttc
gcattggataatcgttcattttataaaccgaaaatctaa
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