Peptostreptococcus anaerobius: M1L67_02170
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Entry
M1L67_02170 CDS
T11430
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
panb Peptostreptococcus anaerobius
Pathway
panb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M1L67_02170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panb03019
]
M1L67_02170
03009 Ribosome biogenesis [BR:
panb03009
]
M1L67_02170
Enzymes [BR:
panb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M1L67_02170
Messenger RNA biogenesis [BR:
panb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M1L67_02170
Ribosome biogenesis [BR:
panb03009
]
Prokaryotic type
rRNA helicases
M1L67_02170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
Hyccin
MCM8_N
Motif
Other DBs
NCBI-ProteinID:
XUR99467
LinkDB
All DBs
Position
420370..422013
Genome browser
AA seq
547 aa
AA seq
DB search
MEITNFNELAVKEEITRAIADLGYEQPSPIQAKAIPVVLEGYDVIGQAQTGTGKTAAFSI
PLLEKIDPSDKRLQAIVLCPTRELAIQVSEEVRKLAKYLHGVKTLPIYGGQPIDRQIKAL
KGGVQVIIGTPGRVIDHINRKTLKPSTVKMVVMDEADEMLDMGFREDIETILSSTPQERQ
TSLFSATMPKAILELTQKYQKEPVHIKVVRKELTVNNIKQFYIETRKSNKLEVLTRLIDV
YNPKLTVVFTNTKKGADELVSDLQARGYGADSLHGDLKQVQRDIVMDKFRHGTIDILVAT
DVAARGIDVDDVECVINYELPQDEEYYVHRIGRTGRAGRDGIAFSFVFGREMRKLKDVER
YTKSKVMKHSIPTVNDVEQKKIGQFFSDIKETLEEGNFSKQLQWVEDFLNEEDYSLIDIC
AAMLKNSLGADEKEEIKEESYYDSRRNRNGGRNGGPRRNDENMTRLFLNVGRNQKIQAKD
ILGAIAGETGINSKYIGTIDIYDKYTFVDVDQNKAKMVIEKMKSRKIRGNKLNIERANVN
KRRRFSK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaaataacaaattttaacgaattggcagtaaaagaagaaataacaagagcgattgca
gatttaggatacgaacaaccgtcaccaattcaggcaaaagcgataccagtagtgctagag
ggatatgatgtaataggtcaggcgcagactggtacaggaaagacagcagcattttctata
ccgctgttggaaaagatagatccaagcgacaagagattacaggcgatagtgttatgccct
actagagaactagctatacaggtgtcagaagaggtgaggaagttagcaaaatacctacat
ggtgttaagactcttccaatatacggtggacaaccaatagatagacagattaaagcatta
aagggcggagtacaggtaataataggtactcctggtagagtaatagaccatattaacaga
aaaactcttaagccatctacagtaaagatggtcgtaatggacgaggcagatgaaatgttg
gatatgggctttagggaagatattgaaactatcctaagctcaacaccacaagaaagacag
acaagtttattctcagctactatgcctaaggctatacttgaactaactcagaaataccaa
aaggaaccagttcatataaaggtagttagaaaggaacttacagtaaacaatatcaagcag
ttctatatcgaaactaggaagtcaaacaagctagaagtacttacaagactgatagatgtt
tacaatccaaagcttacagtagtatttacaaatactaaaaagggagctgatgaactagtt
tctgacctacaggctaggggttatggtgcagactcactacacggagacctaaagcaggta
caaagagatatagtaatggacaagttcaggcatggaacaatagacatcctagttgccaca
gacgtagcagcaagaggtattgacgttgatgatgtcgaatgtgtaattaactacgagcta
ccacaggacgaagaatactatgtacatagaatcggaagaactggtagagctggtagggat
ggtatagcattctcatttgttttcggtagagagatgagaaagctaaaggatgttgaaaga
tatacaaagtctaaggttatgaagcattcaatacctacagttaatgatgtagagcagaaa
aagattggtcagttcttctcagatattaaagaaacactagaagaaggtaatttctcaaaa
cagctacagtgggttgaagatttcttgaatgaagaagactactctctaatagacatatgt
gctgctatgctaaaaaatagcttgggtgcagatgaaaaggaagagataaaggaagaatct
tactatgattcaagaagaaacaggaatggtggaagaaacggtggacctagaagaaatgat
gaaaatatgactaggttattcttaaacgttggtagaaaccaaaagattcaggccaaggat
atactaggtgctatagctggtgaaacaggtattaactctaagtatataggaacgatagat
atctatgacaagtacacatttgtagatgttgaccagaataaggctaagatggtaattgaa
aagatgaagtctagaaaaataaggggcaacaagctgaatatagaaagagctaatgtgaac
aagagaagacgttttagcaagtag
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