Paenisporosarcina antarctica: E2636_01330
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Entry
E2636_01330 CDS
T05927
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
panc
Paenisporosarcina antarctica
Pathway
panc02020
Two-component system
panc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
panc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2636_01330 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E2636_01330 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
panc03021
]
E2636_01330 (rpoN)
Transcription machinery [BR:
panc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2636_01330 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Sigma70_r4
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QBP39878
UniProt:
A0A4P6ZV66
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All DBs
Position
257656..258969
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AA seq
437 aa
AA seq
DB search
MELVLQQKQELNLIMTVKLRQAIELLQYTTYELYQYIREQELENPLIDLVEQKNGSLYEE
KSNGKVKSISPTKMAVDLVSSKDMSMRDKLLEQANLLFKPVQDQKIIRFIIHNLDDNGYL
YLNQNEPFPYGEFEENEIDRGIQLLQQVGPTGIGARDLKECLLLQITIDFPKEKLAECLI
RNYLDLLANKKWNDIVARMNITMTQVKDINDFILTLNPRPCSSISDFSIEYLNPDIIVEI
KESEISFYLNDSYLPKINFNNEYTSLLTNKDETSKYINDKYTSYQWLLSSIEQRRQTIMK
IVKVIINKQESFFKDGFMSLEPLTLKEVAEEIEMHESTVSRATMNKVIQTPKGTFELRMF
FTSKLETVEGNSVSQTKVKWLLETFIAKENKFKPLSDQKIASYFNSEKGITISRRTISKY
REELKIPSSSNRKEIKF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgttctccaacaaaaacaagaacttaatctaataatgacagtgaagttaaga
caagccattgaattattacaatataccacttatgaactgtaccaatatataagagaacaa
gagttggaaaaccccttaattgatttagtagaacaaaagaatggttccttgtatgaagaa
aaatcgaatggaaaggtgaagtcaatcagtcccactaaaatggcagtggatttagtatca
agtaaagatatgagtatgagagataagttattagaacaagccaatttgttatttaagcct
gttcaagaccaaaaaataattagatttataattcataatcttgatgataatggctattta
tatctcaatcaaaatgaaccatttccttatggagagtttgaagaaaatgaaattgacaga
ggaattcagcttcttcaacaagttggtcccactgggataggcgcgagggatttgaaggaa
tgtttactattgcaaattacaattgattttccgaaagaaaaattagctgaatgtctaatt
cggaattatttggatcttttagcaaataaaaaatggaatgatatagttgcacgcatgaat
ataactatgacccaggtaaaagatattaacgactttattctgactcttaatcctagacca
tgttctagcatctctgacttctcaatagaatatttgaatcctgatattattgtcgagatc
aaagaatcggagatttctttttatttgaatgatagttacttgcctaaaattaattttaat
aatgaatatacaagtttgctaactaataaagatgagacgtcaaagtatattaatgataaa
tatactagttaccaatggttgttaagtagtatagaacaacgacgtcaaacgataatgaaa
atagttaaggtcattattaataaacaagaaagcttttttaaagacggatttatgtcactt
gaaccattaactttaaaagaagtcgcggaagaaatagaaatgcacgagtctactgtaagt
agagctacaatgaataaagttattcaaacaccaaaaggaacttttgaacttcgaatgttc
tttacgtcaaagttagaaaccgtagaaggaaattccgtatctcaaacgaaggtaaagtgg
ctcttagaaacttttattgcgaaagaaaataaattcaaaccgttgtcagatcaaaaaata
gcaagttattttaatagtgaaaaaggaattaccatttctagacgtacgattagtaagtat
cgagaagaactaaaaatcccttcttcaagtaatcgtaaagagataaaattttga
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