Paenisporosarcina antarctica: E2636_04445
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Entry
E2636_04445 CDS
T05927
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
panc
Paenisporosarcina antarctica
Brite
KEGG Orthology (KO) [BR:
panc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panc03019
]
E2636_04445 (yhaM)
Messenger RNA biogenesis [BR:
panc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E2636_04445 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
PBCV_P4
Motif
Other DBs
NCBI-ProteinID:
QBP40423
UniProt:
A0A4P6ZW06
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All DBs
Position
888407..889345
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AA seq
312 aa
AA seq
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MKGITQLAVGEAVDHFLLIKQSTKAFTTTGNKFMTLILQDKSGDIEAKLWDTTEEHETLY
HSEAIVRVGGEIQHYRGKNQLRIKSIRAAKDDEGVSLTDLVPSAEKAKEVLFEELMQFFF
EMKNPHIQRITRHLLKKHQAAIMTFPAATRNHHDYVSGLIDHVVSMLKLGKSLCDLYPSL
NKDLLYAGIILHDVGKVTELSGPIATSYTIEGNLIGHITIMVNEISKAAEELQINGEEVM
LLQHMVLSHHGKEEWGSPKKPMLREAEMLHYIDNIDAKMNMLDRALNKTNPGEFSERLFP
LDNRSFYKPTFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtattacacaattagcagtgggagaagctgtagaccattttctactaattaaa
caatctacaaaggcttttacaactacgggaaataaatttatgacactgatactacaagat
aagagtggagatattgaagcaaaactttgggacacaactgaagaacatgagaccttgtac
cattcggaggcgattgtccgtgtaggtggcgaaatccaacactatcgaggaaaaaaccaa
ttgcgaattaaaagtatccgtgctgcaaaagacgatgaaggcgtttcgttaactgatctt
gtaccgtctgcagaaaaagctaaagaagtattgttcgaggaattgatgcaatttttcttt
gaaatgaaaaatccccacattcaacgtattacacggcatttattaaagaaacatcaagct
gccatcatgacattcccagcagcaactagaaatcatcatgattatgtctcaggattaatt
gatcatgttgtttcgatgttgaaactcggaaagtcattgtgtgacttatatccatcgtta
aataaagatttactatatgcaggcatcattttgcatgatgtaggtaaagttacagagtta
tctggaccaatcgcaacttcttatacaattgaagggaatttaataggccatatcaccatt
atggttaatgaaatttcaaaagcagcagaagaattgcaaattaatggagaagaggtaatg
cttcttcaacatatggtgctatcacatcacggtaaagaagagtggggtagtccaaaaaaa
ccgatgctacgtgaagccgaaatgcttcactatattgataatattgatgcgaagatgaac
atgctagacagggcattaaataaaacgaaccctggtgaattttctgagcgtttgttcccg
ctcgataatcgctctttctacaaacctacattcgagtaa
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