Paenisporosarcina antarctica: E2636_05600
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Entry
E2636_05600 CDS
T05927
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
panc
Paenisporosarcina antarctica
Brite
KEGG Orthology (KO) [BR:
panc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
panc03016
]
E2636_05600 (thpR)
Enzymes [BR:
panc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
E2636_05600 (thpR)
Transfer RNA biogenesis [BR:
panc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
E2636_05600 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QBP40617
UniProt:
A0A4P6ZWA2
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All DBs
Position
1103838..1104386
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AA seq
182 aa
AA seq
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MQHYFIGIKLPKDLAQQLVDLRKGWHLERSHKRLPVAEDLHITLLYLGAVESDLLKQLLS
QLDSLSQKFSPIDITLNGVSIFGNPLTPRVVYTAIEEQLSLQLLQKAVLEKCLALFLQVD
KKPFVPHITLAKKWSGQHEMFLKVMDIEKQSFSITDFSVYAINPRETPSYQAIHTIILSG
ST
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaacattattttatcggtattaaattacctaaagatttagcacagcaacttgttgat
ctaagaaaaggttggcatttagaacggtcacacaaaagacttccggtagccgaagattta
catataactttgctatatttaggagcagttgaatctgatttgttgaaacaattactaagt
cagttagattctctctcccaaaaattttcgccaattgatatcacacttaacggggtatct
atattcgggaatcctttgactcctcgagtagtttacacagcaatagaagaacaactaagc
ttgcaactattacaaaaggccgttttggaaaagtgcctggcactttttttacaagtagac
aaaaagccgtttgttccacatattacgctagctaaaaagtggagtggacagcatgagatg
tttctaaaagtaatggacatcgaaaaacagtcattctctataactgatttctcggtatat
gccattaatccgagggaaacaccatcttatcaagcaattcatacgattattttaagtggt
tcaacttaa
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