Paenisporosarcina antarctica: E2636_07470
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Entry
E2636_07470 CDS
T05927
Name
(GenBank) hypothetical protein
KO
K03701
excinuclease ABC subunit A
Organism
panc
Paenisporosarcina antarctica
Pathway
panc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
panc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2636_07470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panc03400
]
E2636_07470
DNA repair and recombination proteins [BR:
panc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2636_07470
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2636_07470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
UvrA_DNA-bind
SMC_N
AAA_29
CA109-like
RsgA_GTPase
NB-ARC
nSTAND1
AAA_25
FtsK_SpoIIIE
AAA_16
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QBP40976
UniProt:
A0A4P6ZZJ1
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Position
1484615..1485991
Genome browser
AA seq
458 aa
AA seq
DB search
MLTRAHFSHNKSEGACEKCSGLGEEIQVNWSAIVDESLSVVEGALLYLDKGYQQYVNGIL
KNTFKFYELDDVLAKPIVSWSEQHKALLYKGAEAARINPEKGFPKTVTGGRFEGVEPMLW
RKLADKGIEDVLKEKFLTTICSACNGERLMAVSREATVQGTRLPELTNYTLESLLHWILD
VSKKLDDKQKSYVEHFLLDMKTKVERLLKVGVGYLTLNRQTITLSGGEQQKIKLAATLDS
TLTGVIYLLDEPTSGLHPKDTQGMIELLKNMRELGNTVIVIEHDPDVMKAADFIIDIGPG
AGTFGGEVIGIGTLDEIKATETSVTGQYLLKEEVVNTKVRVPKEWLLVENVTKYNLKGVT
TRFPIGCFTAVAGASGSGKSTLIFDVMEEMKFANFDQVITVQQTPISKMRRSNVATYTDA
FAVIRNLFSKESLAKERGLRISILALIQQEGAVKIVKV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctaacgcgtgcacatttttcacacaacaaatcagaaggtgcatgtgaaaaatgctcg
gggcttggtgaggaaattcaagtcaattggtcagctattgtggatgaatcactgtcggta
gtagaaggagcgctcctttatttagataaaggctaccaacaatacgtaaacggtatttta
aaaaatacttttaagttttatgaactagacgatgtattagcaaagccaattgtttcgtgg
tctgaacaacataaagcgttactatataaaggtgctgaagcagcacgaatcaatccggaa
aaaggttttccaaaaaccgtgactggtggacgctttgaaggggttgagccaatgctttgg
cgcaagcttgcagacaaaggaatagaagacgtactgaaagagaagtttcttacaacgata
tgtagcgcatgtaacggcgaacgtttaatggcagtaagtcgtgaagcgacagtacaagga
acacgtttaccagaactaacaaattacacgttagaaagcttacttcattggattttagat
gtgtcgaaaaagcttgatgacaagcaaaaaagttatgttgagcatttcttgctcgatatg
aaaacaaaagtagagcgcttattaaaggttggtgttggttatttaacgttaaaccgacaa
acgattacgttatctggtggtgagcagcaaaaaataaagcttgcagcgacactcgattca
acacttactggggtcatatacttactcgatgaaccaacatcgggcttacatccaaaagat
acacaaggcatgattgaacttcttaaaaatatgcgtgaattaggcaatacagtcattgtc
attgagcatgatccagatgttatgaaggcagcagattttattattgatatcggtccaggt
gccggaacatttgggggtgaggtcattggtattgggacgttagatgaaataaaagcgacg
gaaacttccgtaacaggacaatacttattaaaagaagaagttgtgaacacaaaagtacgt
gtgcctaaagaatggttattggtagagaacgtcacaaaatataacttaaaaggagtaacg
acacggttcccaatcggttgttttacagcagtcgcaggtgcttcaggttcaggtaaatca
acgcttatatttgatgtgatggaggaaatgaaatttgcaaatttcgatcaagtgatcacc
gtgcagcaaacaccgatttctaaaatgcgtcgctccaacgttgcaacgtatactgacgct
tttgcagtcattcgtaatttattttcgaaagaatcattagcaaaagaaagaggtttacga
ataagcattttagctttaatacagcaggagggcgctgtgaaaattgtgaaggtttag
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