Paenisporosarcina antarctica: E2636_09550
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Entry
E2636_09550 CDS
T05927
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
panc
Paenisporosarcina antarctica
Pathway
panc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2636_09550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panc03019
]
E2636_09550
03400 DNA repair and recombination proteins [BR:
panc03400
]
E2636_09550
Enzymes [BR:
panc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2636_09550
Messenger RNA biogenesis [BR:
panc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2636_09550
DNA repair and recombination proteins [BR:
panc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2636_09550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
YhfH
Motif
Other DBs
NCBI-ProteinID:
QBP41361
UniProt:
A0A4P6ZY08
LinkDB
All DBs
Position
complement(1911842..1913293)
Genome browser
AA seq
483 aa
AA seq
DB search
MTLNLHKVLFEKFGYASFRAGQQEIIESILNKEDVVAILPTGMGKSLCYQLPGYILPSCV
IIISPLLSLMQDQVEQLKKLGEKRVVAFNSFLTPNEKQTLLQQLERYKFIFLSPEMLMQE
QVKIKLQSMPISLIVADEAHCISQWGYDFRPDYLRLGEWLSHISRPPILALTATATKHVI
EDISTHLTMQQPTLHIQSLDRPNIHYAAVEIDSQENKFERILKQIESFSGPGIIYTQSRR
KADVYAQKLSDKGFRIASYHAGMDQIDRMFVQQQFLNNEIDWVCATNAFGMGVHKDDIRQ
VIHDHIPSSVANYAQEVGRAGRDGSDSLAILFYTKDDEDLSIFITTNDFPDESHIRLFDE
SIKKGLNPNQLISQGLLTETHVRILTFWLARKKINETIEILQQLKQQKVEQIFQMKDILW
NSLCIRQQIVEFFGQKLNSKPLNCCSKCGLNIEELIDSSKEHVRELKLQSWEKRISLLFK
GIE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttgacattgaatcttcataaagtattatttgagaaatttggctatgcttcatttagagca
ggacaacaagaaatcatagaaagtattcttaacaaagaagacgttgtggcaatcttacct
acaggaatggggaagtcactttgctatcaactgccaggatatatactgccatcttgcgta
atcattatttccccattactatctctgatgcaagatcaagtggaacaattaaaaaaatta
ggagaaaaacgagtagttgcttttaattcttttttgacaccaaatgaaaaacagacgctt
ttacagcaattagaaaggtataaattcatttttttatctcctgaaatgttaatgcaagag
caagtgaaaatcaaacttcaaagcatgccaatttcactaattgttgccgatgaagctcac
tgtatttcacaatggggctatgattttagaccggattatttacgtttaggtgagtggtta
agtcacattagtcgaccaccaattttagctttaactgctacagccacaaaacatgtaata
gaagacataagtactcacttgaccatgcaacaacctacccttcatatacaatcactagat
agaccaaatattcactatgctgctgtggaaatagattctcaagaaaataaattcgagaga
atattaaagcaaattgaaagtttttcaggacctgggattatttacactcaatctagaaga
aaagcagatgtgtatgcacaaaaattaagtgacaaaggattcaggattgcctcttatcat
gcaggaatggatcaaattgatcgtatgttcgtccaacaacaatttttgaacaatgagatt
gattgggtatgtgcaacaaatgcatttggaatgggtgtccataaagatgatatccgtcaa
gtcatccatgatcatattccatcatcagttgccaattatgcacaggaagttgggagagca
ggaagagacggttcagattcactagcaattttattttataccaaggatgatgaggatctt
tcaattttcattacaactaacgattttcctgatgaatcccatattagactttttgatgag
tctataaaaaaaggattaaaccccaaccaactaatatcacaaggcttgctaacagaaaca
catgtacgaatattaactttttggctggctcgaaaaaaaattaacgaaacaattgagatt
ttacagcaattaaaacagcaaaaagtggaacaaatatttcaaatgaaagatattttatgg
aattcgctttgtatcagacaacaaattgttgaattctttggtcagaaattgaattcaaag
ccactaaattgttgttcaaaatgtggactgaatatagaagagttaatagattcttcaaag
gaacacgtacgcgaattgaagttacaatcatgggaaaaaagaatatcgttattattcaaa
ggaattgaatag
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