Paenisporosarcina antarctica: E2636_09790
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Entry
E2636_09790 CDS
T05927
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
panc
Paenisporosarcina antarctica
Pathway
panc02024
Quorum sensing
panc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2636_09790 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E2636_09790 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panc03019
]
E2636_09790 (hfq)
03036 Chromosome and associated proteins [BR:
panc03036
]
E2636_09790 (hfq)
Messenger RNA biogenesis [BR:
panc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E2636_09790 (hfq)
Chromosome and associated proteins [BR:
panc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
E2636_09790 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
QBP41408
UniProt:
A0A4P6ZYV7
LinkDB
All DBs
Position
complement(1957027..1957254)
Genome browser
AA seq
75 aa
AA seq
DB search
MKPINIQDVCLNQFRKNSIFVTVFLLNGFQLKGIIKSYDNFTVLLESDGKQQLIYKHAIS
TFVPAKSVVITMDET
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaataaatattcaagatgtttgtttaaatcagtttcgcaaaaatagtatattt
gttactgtatttttattaaatggttttcagttaaaaggaattatcaaatcctacgataac
tttacggtgttattagaatctgatggtaaacagcaactcatttataaacacgccatttct
acattcgtacctgcaaaatcagtagtaataacaatggatgaaacttaa
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