Paenisporosarcina antarctica: E2636_12810
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Entry
E2636_12810 CDS
T05927
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
panc
Paenisporosarcina antarctica
Pathway
panc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2636_12810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panc03019
]
E2636_12810
03400 DNA repair and recombination proteins [BR:
panc03400
]
E2636_12810
Enzymes [BR:
panc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2636_12810
Messenger RNA biogenesis [BR:
panc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2636_12810
DNA repair and recombination proteins [BR:
panc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2636_12810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
DUF559
DUF2726
ResIII
Cas3-like_C_2
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QBP41976
UniProt:
A0A4P7A224
LinkDB
All DBs
Position
complement(2631575..2634838)
Genome browser
AA seq
1087 aa
AA seq
DB search
MFLMLQYNTGYAKVNNHFVIKNVSHKSSKTSDNPILSIIQNFIVRGNPTIATPFLREKLH
LKRSYLHEMADVRFIQNSPTDWSHSIRGDDVNQFYPALTLYKELRQIYNKKGFLVDLFIA
ECPLTHIIPDSNFEKQQVDFYSPLLKLVIEVDGINHEDRHQQKLDQVRDKFLSKYGVTVI
RISTAQIKNKDYRNLTIKLRENYYTHESKIKLFEKYLENPSSYQLHYQLTEIYRFQMLII
ELVKGEQLQFSDKQWDFAVSTQQQAQSLQLALEDLNKWLEVVGKLFNDSIALPKIYVHSS
MKKEYICIDNLVGKYWDDTLNDPSIIYIRDDYFEENNYRTMNTGYIVNYSIKEDQHLSSL
QYLLNVLYGFNTFNAGQTDIIINTLNRNDTVGFLPTGGGKSLTYQICTFLQPAISFVVAP
IKSLMVDQVRSLNDKHFVDCIDYINGDLPPQIASDNLKGFTEGKFLFLVISPERFQQQEF
RNRIQMIQANKQFAYAVIDEAHCLSEWGHDFRTSYLALARTIRRYAPTATFLALTATASS
KVLQDIRNELDISSQNVKTISDFTRKELHFHVVEATRVEKQDKLAEIVNENKKPYPLIIF
TQTAGGHSGCFKISNQLRNQLGLKTAFYSGSKPKDFETQDFAKYKDNVQSSFMNNELDVL
VATKAFGMGIDKSDVRSIIHYGIPSSLESYYQEAGRAGRDRSDSDCYILFTKDGLSDNQR
NILFGLNTKLDEIEKTTRVLQGDLNSIMFLMKKGLKDVDEETAIVSDFYFNYLRDNGVVH
IPKQSDNEKIVYRLALLGLVDDWVIEWKTNTIIVNLNEYDEDNIKDSVFKHIQKYESTFT
ESAIYNNMELLDYLKVYESHSVSPLYKYAYILLKWYNDNVIYSRKQSLKNMFNYVLQFED
SDDFQHKLETYFKRNDDVYLLEKTVAIPHNLNNWWKIYYVDTNDKTVPKNDNEIKDLSIT
LSRFLESYKNDPALNLIEGITTLVSSGSLTQESKQRLIHSIKHITTLEDGLRKELLLSIV
DVANEFLMQEEKLILSKILITNGYNSIEDKKIVNKSFEDKFSYGELVKHVSSKIKEVRIG
GEYPWDN
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgatgcttcaatataataccggttacgcgaaggtcaataaccattttgtgatt
aaaaatgtatctcacaagtcttctaagacttcggataatcctattctttcaataattcaa
aactttattgttcgaggaaatccaacaattgcaacaccatttttacgtgaaaaacttcat
ttaaaacgatcttatctacatgaaatggctgatgtccggtttattcaaaattcaccaaca
gattggagtcattcaattcggggagatgatgtgaatcagttttatcctgctttaacgctt
tataaagaattacgtcaaatatataataaaaaaggatttttagtagatttatttattgca
gaatgtccactcactcatattattccagatagtaattttgaaaagcaacaagtagatttc
tatagtccgctgctaaaactagttatagaagtggatggtattaatcatgaagatagacat
caacaaaagctagatcaagtaagggacaagtttttaagtaaatatggagtcactgtaatt
cggatttcaactgcgcaaattaaaaataaagattatagaaatcttaccattaagctacga
gaaaactattatacacacgaatcgaaaattaaattattcgaaaagtatttggaaaatcca
tcttcatatcaattgcactatcagttaaccgaaatttaccgctttcaaatgttgattata
gaattagtcaaaggtgagcaacttcaatttagcgataaacagtgggattttgcagtaagt
actcagcagcaggctcaatcacttcaactcgctttggaggatttaaataaatggttagag
gtcgttgggaaactgtttaatgattccattgcactccctaaaatatatgtccattcttca
atgaaaaaagaatacatttgtatagacaacttagttgggaaatattgggatgatacatta
aatgatccctctatcatttatataagagacgattattttgaagaaaataattatcgtact
atgaatacaggatacatcgtgaattattcaataaaagaagaccaacatttgtcgtcactt
caatatttattaaatgtgctttatggattcaacacatttaatgcaggacaaactgatatt
attattaatacattaaatcgaaatgacaccgtaggatttttaccaactggaggtggtaaa
tccttaacgtatcaaatctgcacttttttacagccagctatcagttttgttgttgcacca
ataaaatcattaatggttgatcaagttagaagtttaaatgataaacactttgtcgattgt
atcgattatattaacggagatttgccacctcaaattgcatcagataatttaaaaggattt
acagagggaaaatttttatttttagttatttcgccggaaaggtttcaacaacaggaattt
cgcaatcgaattcagatgatacaagcaaataaacaatttgcatatgctgtgatcgatgaa
gctcattgcctatccgagtggggacatgattttcggacatcttatttagcgttggctcga
actataagaagatatgcgccaaccgcaacatttttagcattaaccgctacagcctcatca
aaagtattacaagatatccgtaatgaattagatatttctagccaaaatgtaaaaactatc
tcagactttacaagaaaagaattacattttcatgtagttgaggctaccagggttgagaaa
caagataagttagctgagatagtaaatgaaaataaaaaaccttatcctctaattattttt
acacagacagcaggtggtcatagcggatgttttaagataagtaatcagctgagaaatcaa
ttgggcttaaaaacggctttttatagtgggagcaaaccaaaggacttcgaaacgcaagac
tttgcaaaatataaagacaacgttcaaagttcatttatgaataatgaattagatgtatta
gttgctacaaaggctttcggtatggggattgacaagtcggatgttcgttctattattcat
tacggtattccttcttctctagaatcatattatcaagaggcaggtagagcgggtagggat
cgttctgattctgattgttatattttatttacaaaagacggtttatcggataatcaaaga
aatattttatttggattaaatacgaagttagatgaaatagaaaaaacaacaagagtttta
caaggcgatttaaatagtatcatgtttttaatgaaaaaaggattaaaggatgttgatgaa
gaaactgcaatagtcagtgatttctattttaattatctgagagacaatggggtagtgcac
atcccaaaacagagtgataatgaaaaaatagtatacaggctggcacttctgggacttgta
gatgattgggtaatagaatggaagacgaatacaattattgttaatctaaatgaatatgat
gaggacaatattaaggatagtgtttttaaacatattcaaaaatatgagtctacttttaca
gaatcagctatatacaacaatatggagttgctagattatttaaaggtttatgaaagccat
tctgtttcacctttatataagtatgcttatattttacttaaatggtataacgataatgtt
atatactctcgtaaacaatcacttaaaaatatgtttaattacgtactacagtttgaagat
tcagatgactttcaacataaattagaaacttattttaaacgtaatgacgatgtgtattta
ttagaaaaaacagttgccattcctcataatttaaataattggtggaaaatctattatgtg
gacacaaacgataagacagtacccaaaaatgataatgagataaaagatttatctattaca
ttaagtcgatttctagaaagttataaaaatgatccagctttaaatttaatagaaggaatt
actactttagttagtagcggctctttaactcaagaatctaaacagcgtttaattcactct
attaaacatatcactacattagaagatggccttcgtaaagaattattgttatccattgta
gatgtagcaaatgaatttttaatgcaggaagaaaaattgatattgagcaaaatattgatt
actaatggttataattcaatagaagataaaaaaattgtcaataaatcttttgaagataaa
ttttcttatggcgaacttgtaaaacatgtaagttctaaaattaaagaagtaagaataggt
ggtgaatatccgtgggacaattag
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