Pandoraea sp. XY-2: DRB87_00225
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Entry
DRB87_00225 CDS
T06086
Name
(GenBank) selenocysteine synthase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00450
Selenocompound metabolism
pand00970
Aminoacyl-tRNA biosynthesis
pand01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DRB87_00225
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DRB87_00225
Enzymes [BR:
pand01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
DRB87_00225
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GFIT
Motif
Pfam:
UPF0425_C
Motif
Other DBs
NCBI-ProteinID:
QBC30095
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Position
complement(61375..62685)
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AA seq
436 aa
AA seq
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MSSVNIERHSVVASAIKTDSFGNPIDPTVGFARGSIIKSSIEEALRLRHGQHIAAQRVRL
LGSESIGVFTGNQRDFPIVPDDIATLCEEWVGPGLAAEELRQVAIGHMGGRSADAVATFN
RTSAGIIATIAALAGGLPVVSVVPPGGRSHASVVRGAKIAGVPVVEAQGDKGWQGAINEH
RPALVVITTVTSSLERMQDGVTTQVIQYAHTSGAKVFLDEAYGARLRTVLHRGQLSLQLG
ADISITNCDKAGLSGPRAGVLVGRADLVTAAGAKGAEFGMEARAPITAAVLRSLKKYEPD
DLRKEAEAGQKLAAVLEETLGRDLVQRSDLGPMVEEDAVLRVLLRMAGKDGSTPVVVPCE
ATSALGMILLQDHGVLTVNTHGQPGARVSLRLKPTLDALDRVGGFDAVVHAVMDSLEKVA
QVIGDRAAISQIIIGK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgtcaacatcgaacggcattccgtcgtcgcatctgccataaagacggatagt
tttggaaaccccattgacccgacggtgggcttcgcgcgtggctccatcatcaaatccagt
atcgaagaagcccttcgtcttcgacacggccaacacatcgcagcgcagcgggtacgactg
ctggggtctgagtcgattggcgtgttcacaggcaaccaacgcgactttccgatcgttccc
gacgacatcgcaacgttgtgcgaggagtgggtgggtcccgggctcgcggcagaagagttg
cgccaagtcgccatcggtcatatgggcggtcgctcggctgacgcggttgcgaccttcaat
cgcacgagtgccggcatcattgcgactattgcggcgttggccggcggcttgccggtggta
tcggtcgttccgccgggcggacgttcgcacgcctctgtcgttcgcggcgccaaaattgcc
ggcgtgcctgtggtcgaggctcagggcgacaagggttggcagggcgccattaacgagcac
cgaccggcactcgtcgtcattaccaccgtgaccagtagcctggagcgaatgcaagacggc
gttaccacgcaagtcatccaatatgcccacacctcaggcgcaaaagtatttctcgacgaa
gcctatggtgcccgcctgcgtacggtcctccatcgcgggcagttgagtctgcagttaggc
gccgatatctccatcacgaactgcgacaaggcgggtctgtctggcccgcgcgccggcgtg
ttggtcgggcgagccgacctggtcacggccgccggtgccaagggcgcggagtttggcatg
gaggcgcgcgcgccgatcaccgctgcggtacttcgctcgctcaagaagtatgagcctgac
gacttgcgcaaggaagcggaggccggccagaagctcgccgcagtgctggaggagacgctt
ggacgggacctcgtccagcgaagcgacctcgggcccatggtcgaagaagacgccgtcctg
cgcgtgctgttacgcatggcgggcaaagatggttcgacaccggtcgtggtcccgtgcgag
gcgacttcggcactcgggatgatcctcttgcaagatcatggcgtgctgacggtcaacacg
cacggccagcctggcgcgcgcgtttcgctgcgcctgaaacccacgcttgacgcattggat
cgcgttggcggatttgacgcggtggttcatgcggttatggattcgctggaaaaggtcgcg
caagtcataggcgaccgcgccgccatttcgcaaatcatcattggtaagtga
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