Pandoraea sp. XY-2: DRB87_00875
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Entry
DRB87_00875 CDS
T06086
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00860
Porphyrin metabolism
pand01100
Metabolic pathways
pand01110
Biosynthesis of secondary metabolites
pand01240
Biosynthesis of cofactors
Module
pand_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
DRB87_00875 (hemN)
Enzymes [BR:
pand01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
DRB87_00875 (hemN)
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
QBC33654
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Position
complement(218475..219842)
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AA seq
455 aa
AA seq
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MHFDAQLLARYDVNGPRYTSYPTALQFRDNFGADDYARAAAQSKRTGKPLSLYVHVPFCD
TVCFYCACTKIVTHNRAHAQAYVERLHTEIARQASLLGAGRGLAQMHWGGGTPTFLSLEQ
IASLVEAISRHFVMTLDDSAEYTIEIDPRSAGPASIRALRALGFNRLSIGVQDFDPRVQA
AIHRVQPRALVEATLDAARSCGFRSVNFDLIYGLPYQTSESFSNTLDAVIEMAPERLSVF
SYAHLPQQFKMQRCLPDALPDGPQKLALLQTIIARLSAAGYVYIGMDHFARPDDELARAQ
AAGSLHRNFQGYSTRADCDLVGVGMSAIGRVGDSYAQNAKTLKAYYEAIDAGGLAIARGV
RLDDDDHIRRDVISRLMCHMSLEFAPLEQAYDIRFASYFASELGELAELAADGLVAIEAH
GLRILPAGRLLVRVVAQVFDRYRRGNAHSRCAKVM
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atccacttcgatgcacaactgctcgcccgttacgacgtgaacgggccgcgctacacctcg
tacccgacggcactgcaattccgtgacaacttcggcgctgacgactatgcgcgtgcagcc
gcgcagtccaaacgcactggcaaaccgctctcgctatatgtccacgtgccgttctgcgac
acggtgtgcttctattgcgcgtgcaccaagatcgtcacgcacaatcgcgctcacgcgcag
gcctacgtcgagcgcctgcatacggagatcgcacggcaggcgtcgctgctcggcgccggg
cgcgggctcgcgcagatgcattggggcgggggcacgccgacgttcctgtcgttggaacag
atcgcctcccttgtcgaggccatcagccgccacttcgtgatgacgctcgacgacagcgcc
gagtacaccatcgaaatcgacccgcgcagtgccggcccggcatcgattcgcgccttgcgc
gcgctcgggttcaatcgtctgtccatcggggtgcaggatttcgatccccgtgttcaggcc
gcgattcatcgcgtgcagccgcgcgcgctggtcgaagctacgctcgacgcggcgcgaagt
tgtggtttccggtcggtcaacttcgatctgatctacggcctgccgtatcaaacgtccgag
tcgttctcgaatacgctcgacgccgtgatcgagatggcgccggagcgcctgtcggtcttc
agctacgcgcatctgccacaacagttcaagatgcagcgctgcctgcccgacgccctgccg
gacggcccgcaaaagctggcgctgttgcagacgatcattgcccgcctgagtgcagcgggc
tatgtctatatcggcatggatcacttcgcgcggcccgacgatgaactcgctcgtgcgcag
gccgctggcagtctgcatcgcaacttccagggctacagcacacgggccgattgcgacctc
gtcggggtgggcatgtcggccatcggccgggtgggggatagctacgcacagaacgccaag
accctgaaggcgtattacgaagccatcgatgccggtggactcgccatcgcgcgtggcgtg
cgactcgatgacgacgaccatatccggcgcgacgtcatttcgcgcctgatgtgccacatg
tcgctggaattcgcgccactcgaacaggcttacgacatccgcttcgccagctattttgcg
agtgagctgggcgagttggccgaactggcggccgatggtctcgtggccatcgaggcccac
ggactgcgcatcttgccggccggacgcttgctggttcgcgtcgtcgcccaggtcttcgat
cgctatcgtcgcggcaacgctcactcgcgatgcgcaaaagtgatgtga
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