Pandoraea sp. XY-2: DRB87_01110
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Entry
DRB87_01110 CDS
T06086
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00300
Lysine biosynthesis
pand00470
D-Amino acid metabolism
pand01100
Metabolic pathways
pand01110
Biosynthesis of secondary metabolites
pand01120
Microbial metabolism in diverse environments
pand01230
Biosynthesis of amino acids
Module
pand_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DRB87_01110
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DRB87_01110
Enzymes [BR:
pand01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DRB87_01110
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QBC33656
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Position
268875..269726
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AA seq
283 aa
AA seq
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MKLKFTKMQGAGNDFVVIDGISQSIDFTPEQWRALADRHFGVGADQLLLVERSTQPGVDF
RYRIFNADGGEVEHCGNGARCFVKFVRDTGLTDKRTVRVEVQQGLITLTMRDDGQVSVDM
GAPILTASDVPFDASGLAGRGEGDDTLWPLDVAGKTTWISVVSMGNPHAVQVVDNVDTAP
VETDGPLIERHARFPRRVNAGFLQVVDKHQARLRVYERGAGETLACGTGACAAAVAGIRR
GLLAAPVAIETHGGTLTIDWDGASGPVIMTGPATTVFEGTIEI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaattcaccaagatgcagggtgccggcaacgacttcgtcgtgatcgacggc
atctcgcaatccatcgatttcacgcccgagcagtggcgcgcgctcgccgaccgccatttc
ggcgtcggcgcagaccagctcctgctcgtcgaacgctcgacgcagcctggcgttgacttc
cgctatcgcatcttcaacgccgacggcggtgaggtggagcattgtggcaacggggcgcgc
tgcttcgtcaagttcgtgcgcgacacggggttgaccgacaagcgcacggtgcgcgtcgag
gtgcagcagggcttgatcacgctcacgatgcgcgacgacggccaggtcagcgtggacatg
ggcgcgccgatcctcacggcgtcggatgtgccgttcgacgccagcgggctggccgggcgg
ggcgagggcgacgacacgctatggccgctcgacgtggccggcaagacgacgtggatttcc
gtggtctcgatgggcaatccgcatgcggtgcaggtggtggataacgtcgataccgcgccg
gtggaaacggacggcccgctgatcgagcgtcacgcgcgcttcccgcgccgcgtgaatgcg
ggcttcctgcaggtggtggacaagcatcaggcgcgtctgcgcgtgtacgagcgcggtgcg
ggcgagacgctcgcctgcggcaccggcgcgtgcgcggcggcagtggcaggcatccgccgc
gggctgctggccgcgcccgtggccatcgaaacgcacggtggcacgctcaccatcgactgg
gacggcgcaagcggtccggtcatcatgacgggacccgcgaccacggtcttcgaagggacg
atcgagatctga
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