Pandoraea sp. XY-2: DRB87_01765
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Entry
DRB87_01765 CDS
T06086
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand03420
Nucleotide excision repair
pand03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DRB87_01765
03430 Mismatch repair
DRB87_01765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pand03400
]
DRB87_01765
Enzymes [BR:
pand01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DRB87_01765
DNA repair and recombination proteins [BR:
pand03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DRB87_01765
MMR (mismatch excision repair)
Other MMR factors
DRB87_01765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QBC30335
LinkDB
All DBs
Position
404082..406190
Genome browser
AA seq
702 aa
AA seq
DB search
MSEQTTAPARDPWAELNDRQREAVDYGVGVGVGVGVGDDGAPGGPLLVIAGAGSGKTSTL
AHRVANLIVRGADPNRILLLTFSRRAAGEMERRVGAVLQKVLGLASSQPPSLPWAGTFHA
IGARILRDVATRIGLSEAFTIHDRSDAEDLLGLARHDLGLSATQSRFPLKGTCLSIYSRV
VNSQAPLAEVLAKHFPWCAQWEAQLKTLFGAYVDAKQAQHVLDYDDLLLYWAETMSAPEL
ARELGERFDHVLVDEYQDTNRLQAQILLAMKPDGRGLTVVGDDAQSIYAFRAATIRNILD
FPGQFAEPAHVVTLERNYRSTQPILDASNAVIAESNERYAKALWTDRQSTHLPQLVNVSD
ESGQARWVADQVLAQRETGTRLMQQAVLFRTGSHSAALELELTRRNIPFVKFGGLKFLEA
AHVKDMLSILRWAHNPASRLSGFRVAQLIPGIGPVSATRLLDAMSASAAPAQVLAGFKPP
SAAAADWRAFVDVFIALHDTRLSWPADVDLALRWYAPLLTQRFDDAAVRQADLEQLARIA
GTYGSREQFLTELTLDPPDATSAQSGPPLLDEDYLILSTIHSAKGQEWRSVYVLNVVDGC
IPSDMSTGDDEDIEEERRLLYVAMTRAKESLQLVVPQRFYVHQQTGMGDRHVYGTRSRFV
SDTMLPLYEILPKPREGEVPRRPVGDVTVHIDVARKLRNAWS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacagacgaccgcccctgcccgcgatccgtgggccgaactcaacgaccgccag
cgcgaagccgtcgactacggtgtcggtgtcggtgtcggtgtcggtgtcggtgacgatggc
gcgcccggcgggccattgctcgtcatcgccggcgccggctcgggcaagaccagtacgctt
gcgcatcgcgtcgccaacctcatcgtgcgcggggccgaccccaaccgtatcttgctgctc
acgttctcgcgtcgcgccgccggcgaaatggagcgacgcgtgggcgcggtgctgcaaaag
gtgctggggctggcgtcgtcgcaaccgccgtcgctaccgtgggccggcacgtttcacgcc
attggcgctcgcattctgcgcgatgtggcaacgcgcatcggcctgtcggaagcgttcacc
attcacgaccgcagcgatgccgaggatttgctgggccttgcgcgccacgacctcggcttg
tccgccacgcagtcgcgcttcccgctcaagggcacatgcctctcgatctattcgcgcgta
gtgaacagtcaggcaccgcttgcggaagtgctcgcgaagcacttcccatggtgcgcgcaa
tgggaggcgcagctcaagacgctcttcggtgcctacgtcgacgcgaagcaagcgcagcac
gttctcgattacgacgatctgctgctgtactgggccgagacgatgagcgcgccggaactc
gcgcgcgaactgggcgagcgcttcgaccacgtgctcgtcgacgaataccaggacaccaat
cggctgcaggcgcagatcctgctcgcgatgaaacccgacgggcgcggcctcaccgtcgtg
ggggacgatgcgcagtcgatttatgcgttccgcgcggccaccatccgaaacatcctcgac
tttcccgggcaatttgccgagcccgcccatgtcgtcacgctcgagcggaattaccgttcg
acacaaccgattctcgatgcgtccaatgccgtcatcgccgagtcgaacgagcgctacgcg
aaggcattgtggaccgatcggcaatcgacgcatctgccgcaactcgtcaatgtgagcgac
gagtcgggacaggcccgctgggtcgcggatcaggtgctcgcccaacgtgagaccggcacc
cgattgatgcagcaggcggtgctgttccgcaccggtagccatagcgcggcgttggaactg
gaactcacacgccgcaatatcccgttcgtgaaattcggcggcttgaagtttctcgaagcg
gcgcacgtcaaggatatgttgtcgatcctgcgttgggcgcacaacccggccagccggttg
tcggggtttcgtgtggctcagttgatccccggcatcgggcccgtgagcgcgacgcgtttg
ctcgacgccatgtcagcctccgccgcgcccgcgcaggtgctcgcgggcttcaagccgccg
tcggcggccgctgccgattggcgcgcgttcgtcgacgtcttcatcgcgttgcacgacacg
cggctgtcgtggccggccgatgtcgatttggcgctgcgctggtatgcgccgctgctgaca
caacgcttcgacgacgcggccgtgcgccaggcggacctcgaacagctcgcccgcattgcg
ggcacgtatgggtcgcgtgagcagtttctgaccgagctgaccctcgatcctcccgacgcc
acgagtgcgcaatccggcccgccgttgctcgacgaggactacctgattctgtcgacgatc
cacagtgcgaaagggcaagagtggcgctcggtctatgtgctcaacgtcgtcgacggctgc
attccgtccgacatgagcacgggcgacgacgaggacatcgaggaagagcgtcggctcttg
tatgtggcgatgacgcgcgcgaaggaatcgctgcaactggtcgtgccgcagcggttttat
gtgcatcagcaaacgggaatgggcgatcgccacgtgtacggcacgcgcagccgtttcgtc
tccgacacgatgttgccgctgtacgaaattctcccgaagccgcgcgagggcgaggtgccg
cgaaggccggtgggcgacgtgaccgtgcatatcgatgtcgctcgcaagcttcgtaacgcg
tggtcttga
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