KEGG   Pandoraea sp. XY-2: DRB87_02390
Entry
DRB87_02390       CDS       T06086                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pand  Pandoraea sp. XY-2
Pathway
pand02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pand00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DRB87_02390
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pand02022]
    DRB87_02390
Two-component system [BR:pand02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   DRB87_02390
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_16 AAA_2 HTH_50 AAA HTH_30 HTH_Tnp_ISL3 TIP49 AAA_7
Other DBs
NCBI-ProteinID: QBC33689
LinkDB
Position
533029..534390
AA seq 453 aa
MYKNLQILFVEDDELVRRATLQSLQLAGLDAFGLASAEAARERITPDFAGIVVSDIRLIG
MSGLELLSHLRQHAPEVPVILVTGHGDISMAVQAIRDGAYDFIEKPFAPDRLIESAKRAL
ETRKLMLENQALRRELAEQGGRASRIIGRSPAMETLRTLIANVAMTDAPVLINGDTGTGK
ELVARSLHELSRRRDAPFVALNCGALPEAIFESEMFGHEVGAFTGAAKRRIGKLEHASGG
TLFLDEIESMPLALQVKLLRVLQEGVLERLGSNQSVRVDCRVVAAAKGDMEALVREGTFR
RDLYYRLNVVTLALPPLRERREDILPLFEHFMLDAAVRYGRPAPVVSDRMRQELMQADWP
GNVRELRNAADRLVLGVASAPEGDSLAPLPLKEQVDRFERAVLQEALEHSKGNVAATAEA
LHVPKATLYEKLKRYGLHTRGQGDGGEGGQTMR
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtacaagaaccttcagatcttatttgtcgaagacgacgaactcgtgcggcgtgccacg
ctgcagagcctgcaactcgccggactcgacgccttcgggcttgcctcggccgaagccgcg
cgcgagcgcatcacgccggatttcgccggcatcgtcgtgtcggacattcgcctgatcggc
atgagcgggcttgagctgctttcgcatctgcgtcagcacgcgcccgaggtgcccgtgatc
ctcgtgaccggtcacggcgatatttcgatggccgtacaggcgattcgcgatggtgcctac
gacttcatcgagaagccgtttgcgccggaccgtctgatcgaatcggccaagcgtgcgttg
gaaacacgcaagctcatgctggaaaaccaggcgttacggcgcgaactggcggaacagggc
ggacgcgcctcgcgcatcatcggacgcagtccggcaatggagacgctgcgcacgctcatc
gccaacgtggcgatgaccgatgcgccggtgctcatcaacggcgacacggggacgggcaag
gagctggtggcgcgcagtctgcatgagttgtcgcgccgccgcgatgcgccgttcgtcgcg
ctgaactgcggtgcgttgcccgaggcgattttcgagagcgagatgttcggtcacgaggtt
ggcgcgtttaccggcgcggccaaacgtcgcatcggaaagctcgaacatgcgtcgggcggc
acgctgtttctcgacgagatcgagagcatgccgcttgcgttgcaggtcaagttgctgcgc
gttttgcaggagggtgtgctggaacgcttgggctcgaatcaatcggttcgtgtcgactgc
cgcgtggtcgcagctgcgaagggcgatatggaagcgctggtgcgcgagggcacattccgt
cgcgatctgtattaccggctgaatgtggtgacgttggcgttgccgccgctgcgcgagcgt
cgcgaggatatcctgccgctgttcgagcacttcatgctggacgccgccgtgcgttatgga
cgtccggcgcccgtggtctcggatcggatgcgtcaggagctgatgcaggcagactggccg
ggcaacgtgcgtgagcttcgcaacgcggcggatcgtctggtgctcggtgtggcgagtgcg
cccgagggcgactcgcttgcgccgctgccgctcaaggagcaggtggaccgcttcgagcgc
gccgtgctgcaagaggcgctggagcacagcaagggcaacgtggcggcgacggccgaggcg
ctgcatgtgcccaaggcaacgctgtatgaaaagctcaagcgttacggtctacacacgcgc
ggtcaaggcgatggaggcgagggcggtcagacgatgcggtga

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