Pandoraea sp. XY-2: DRB87_05640
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Entry
DRB87_05640 CDS
T06086
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pand
Pandoraea sp. XY-2
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pand03032
]
DRB87_05640
03400 DNA repair and recombination proteins [BR:
pand03400
]
DRB87_05640
Enzymes [BR:
pand01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DRB87_05640
DNA replication proteins [BR:
pand03032
]
Prokaryotic type
DNA Topoisomerases
DRB87_05640
DNA repair and recombination proteins [BR:
pand03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DRB87_05640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QBC30951
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Position
1213314..1215941
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AA seq
875 aa
AA seq
DB search
MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRALFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDASVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMAKIGHELLADIDKETVDFGPNYDGSEKEPLILPARIPNLLLNGSSGIAVGMAT
NIPPHNLNEVVEGCLHVLKHPDATIDELIEIIPAPDFPTAGIIYGISGVREGYRTGRGRV
VMRAKTHFEDIDRGQRVAIIVDELPYQVNKRSLLERIAELVNEKRIEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKHTQLQDTFGMNMVALVDGQPKLLNLREMLVHFLAHRRE
VITRRTIYELRRARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKAALMEKAWDSSVV
RDMLSRAESDTQGGRAAYRPEGLDAAVGMQADGLYRLSETQAQEILQMRLQRLTGLEQDK
IVSEYKEVMAQIADLLDILARPERVTVIISEELTAVRAEFGDERRSTIEHNATELDTEDL
ITPQDMVVTLSHSGYIKSMPLSEYRAQKRGGRGKQAAATKDDDWIDTLFIANTHDTILCF
SNRGRVYWIKVYEVPQGSRTSRGRPIVNMFPLQDGEKINVVLPVKAYTEDRFVFMATSLG
TVKKTPLTAFSRPLKKGIIAVNLDDGDVLIGAAITDGAHDVMLFSDSGKAVRFDENDVRP
MGREARGVRGMQLEDGQTVIALLVAENEQQSVLTATENGYGKRTSITEYTRHGRGTKGMI
AIQTSERNGRVVAATLVEPDDEIMLITTGGVLIRTRVSEIREMGRATQGVTLISLDEGTT
LSGLQRIVESDAEIAENGGDAQDGDDTPEADVTES
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttcgccaaagaaactctcccgatttcgcttgaagaagaaatgcggcggtcg
tatctcgattacgccatgagcgtgatcgtaggccgcgctctgccagacgtgcgcgacggc
ctgaaaccggtgcaccgccgtgcactgtttgccatgcacgagttgaataacgactggaac
cgggcatacaagaagtcggcacgtatcgtcggtgacgtcatcggtaagtaccacccgcac
ggcgacgcctctgtatacgacaccatcgttcgtatggcgcagccgttctcgctgcgctac
atgctggtcgacgggcaggggaacttcggctcggtcgacggcgacaacgccgctgccatg
cgatacaccgaagtgcgcatggccaagatcggccacgagctgctcgcggacatcgacaag
gaaaccgtcgacttcggtccgaactacgacggcagcgaaaaagagccattgatcttgccg
gcccgcatcccgaacctgctgctcaacggttcgtcggggattgcggttggcatggccacg
aacatcccgccgcacaatctcaatgaagtcgtggaaggctgtctgcacgtgctcaagcac
ccggacgccaccatcgacgaactcatcgagatcattccggccccggatttcccgacggcc
ggcatcatctacggcatctccggcgtgcgcgaaggctaccgcaccggtcgcggtcgtgtg
gtgatgcgagcaaagactcacttcgaagacatcgatcgcggccagcgcgtggcgatcatc
gtcgacgagctgccgtaccaggtgaacaagcgctcactgctcgagcgtattgccgagctg
gtcaacgagaagcgtattgaggggatttccgacattcgcgacgagtccgacaagagcggc
atgcgcgtggtaatcgaactcaagcgcggcgaagtgcccgaggttgtgctcaacaatctc
tataagcacacgcagctgcaagacacgttcggcatgaacatggtggcgctggtcgacggc
cagcccaagctgctgaacctgcgcgaaatgctggtgcacttccttgcgcaccgccgcgaa
gtgattactcgccgcacgatctacgaactgcgtcgcgcccgtgagcgtgggcatgtgctc
gagggtctggcggtagcgcttgccaacatcgacgacttcatcgcgatcatcaaggcggcg
ccgacaccgccgatcgcgaaggccgcgttgatggaaaaggcgtgggattcgtcggtcgtg
cgcgacatgctctcgcgtgccgagagcgatacgcagggcggccgtgcggcctaccgtccg
gaagggctcgacgccgcagtgggcatgcaggccgatggactctaccgtctgtcggagacg
caggcgcaggaaattctgcagatgcgtctgcagcgcctgaccggtctggaacaagacaag
atcgtctccgagtacaaggaagtgatggcgcagatcgccgacctgctcgacatcctggcg
cgtcccgaacgcgtgacggtgatcatcagcgaagaactgacggccgtgcgtgccgagttc
ggcgacgagcgtcgttcgaccatcgaacacaacgccaccgaactcgacaccgaagacctg
attacgccgcaggacatggtggtcacgctgtcgcattcggggtacatcaagtcgatgccg
ttgtccgaataccgcgcgcagaagcgcggtggccgcggcaagcaggccgccgcgaccaag
gacgacgactggatcgacacgctgttcatcgccaatacgcacgatacgattctgtgcttc
tcgaatcgcggccgtgtgtactggatcaaggtgtatgaagtgccgcaggggtcgcgaacc
tcgcgcgggcgtccgatcgtcaatatgttcccgttgcaggacggcgagaagatcaatgtg
gtgctgccggtcaaggcatacacggaagatcgcttcgtgttcatggccacgagcctgggc
acggtcaagaagacgccgctgacggccttcagccgtccgctcaagaagggcatcatcgcg
gtgaatctcgatgacggcgacgtgttgatcggcgcggccatcaccgacggtgctcacgac
gtcatgttgttctcggacagcggcaaggcggtgcgtttcgacgaaaacgatgtgcgtccg
atgggacgcgaagcgcgtggcgtgcgcggcatgcagctcgaagacgggcagacggtcatc
gcgctgctggttgccgagaacgagcagcagtcggtgctcacggcgactgaaaacggctac
ggcaaacgcacgtcgatcactgaatatacgcgccacggccgtggcactaagggtatgatt
gcgatccagacgagcgagcgcaacggccgggtggtcgcggcgacgttggtcgagccggat
gacgagatcatgctgatcacgaccggcggggtgctgatccgtacgcgcgtgtcggaaatt
cgcgaaatgggccgggccacgcagggggtgacgctgatcagcctggacgaaggcacgacg
ctttcgggcctgcaacgcatcgtcgagtccgatgccgaaatcgcggagaatggcggtgat
gctcaagatggcgacgacacgccggaagcggatgtcacggaatcatga
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