Pandoraea sp. XY-2: DRB87_07215
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Entry
DRB87_07215 CDS
T06086
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00450
Selenocompound metabolism
pand00970
Aminoacyl-tRNA biosynthesis
pand01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DRB87_07215
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DRB87_07215
Enzymes [BR:
pand01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
DRB87_07215
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Motif
Pfam:
SelA
Se-cys_synth_N
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QBC31190
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Position
1582549..1583979
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AA seq
476 aa
AA seq
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MAEHDLEFAGAADLPSLDRLLGMPDFQAALVDFGRTQVTDALRRDLDACRAAALAGTLTH
DTLVPAAFGARVTRALTERNRAALRPVFNLTGTVLHTNLGRALLPEVAVEAVMQALTAPA
NLEFDLATGGRGDRDDLVAPLLCELTGGEAATVVNNNAAAVLLMLATLAKRRDVVVSRGE
LVEIGGAFRIPDIMTHAGAKLVEVGTTNRTHAADYRNAIGEKTALLMKVHCSNYAVTGFT
KSVDVAEVVQIAKPHSVPVAVDLGSGTLTPLERWGLPHETTVQETIAAGADLVTFSGDKL
LGGPQAGMIVGRKDLIARIKKHPLKRALRVGKLTLAALEPVLRLYRDPDHLAERLTTLRL
LTRTRADMMAQAQRLAPVLAQSLGDAYTVSAAPMVSQIGSGALPVEQLPSYGLTIMPAGG
SKRGSGRALAALEAALRALPYPVIGRIADQTLWLDLRCLEATDEARLALQFVELRT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcacgatcttgagtttgcgggggcggcggatctcccgtcgctagaccggctg
ctggggatgcccgactttcaggcagcgttggtcgacttcggtcgcacgcaggtgaccgac
gcgttgcgtcgcgatctcgacgcgtgccgcgcggcggcgcttgcgggcacgcttacacac
gacacgctggtcccggctgccttcggggcgcgcgtgacgcgtgcgttgaccgagcgcaac
cgggcggcgctgcgtccggtcttcaatctcaccggcaccgtgctgcacacgaaccttggg
cgggcgttgctgcccgaggttgccgtggaagcggtcatgcaagcgctcacggcgccggcc
aacctcgaattcgacctcgcgaccggcggacgcggcgaccgcgacgatctcgtcgcgccc
ttgctgtgcgagttgacgggcggcgaggcggcaaccgtggtgaacaacaacgcggcggcg
gtgctgctgatgctggcgacgcttgcgaagcgccgcgacgtcgtggtgtcacgcggtgag
ctggtggaaatcggcggtgcgtttcggattcccgacatcatgacgcatgctggcgcgaaa
cttgtcgaagtgggcacgaccaaccgtacgcatgcggccgactaccgcaatgccatcggc
gagaagacggcattgctgatgaaggtccattgcagcaattacgcggtcaccggctttacc
aagagcgttgacgttgccgaggtcgtgcagattgcgaagccgcacagcgtgccggtggcg
gtcgatctcggcagcggcacgctgacgccgctggagcgctgggggctgccgcacgagacc
accgtgcaggagacgatagccgcgggggccgatctcgtgacgttctccggcgacaagctg
ctgggcggtccgcaggcgggcatgatcgtcgggcgcaaggatctcatcgcgaggatcaag
aaacatccgctcaagcgagcgctgcgcgtgggcaagctcacgcttgcggcgctggagccg
gtgttgcgtctgtatcgcgatcccgatcatctggccgagcggctcaccacattgcggttg
ctcacgcgaacgcgcgccgacatgatggcgcaggcgcagcgtctggcgccggtgctcgcg
cagtcgctgggcgatgcttataccgtgagcgccgcgccgatggtgagccagatcggcagc
ggcgcgctaccggtcgagcagttgccgagttatggcttgacgatcatgcctgcgggcggc
agcaaacgcggcagcggacgtgcgctggcagcgctcgaagccgcgttgcgcgcgctgccg
tatccggtgatcggccggattgccgatcaaacgctatggctcgatctgcgatgtctcgaa
gcgactgacgaagcgcgtctggcgttgcagttcgtggagctacgcacatga
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