Pandoraea sp. XY-2: DRB87_07265
Help
Entry
DRB87_07265 CDS
T06086
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
pand
Pandoraea sp. XY-2
Pathway
pand02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DRB87_07265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pand03000
]
DRB87_07265
Transcription factors [BR:
pand03000
]
Prokaryotic type
Helix-turn-helix
Other families
DRB87_07265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
Mg_chelatase
AAA_2
AAA
AAA_16
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QBC31198
LinkDB
All DBs
Position
complement(1593315..1594898)
Genome browser
AA seq
527 aa
AA seq
DB search
MSSQHSESDSPAFWREQEMLLLQQIMSLVGKGLSPDVILRETLHLMSELLGLNRGRIVLL
DDAATDSCRIQYAYGLKPEEIERGHYKVGEGITGHVLRHGQLTIVQDIDRDDVFLARAVT
RDRLPPGPVSFIALPIRIEDRSVGVLACHRIRVRNRALSSDVSILRILSTLAGHLLHLDS
MMKAKTRALEEQNEMLMHALEHESAKYGIVGTSPALLKAISELERVSDASASVLLLGDSG
TGKELFARALHLSGQRRDKPFIKVNCAAIPDTLFESELFGYERGAFTGATGVREGLFEQA
SSGTIFLDEIGELPLTLQGKLLRTLQEGTITRLGGKREIKVDVRLVAATNRSLETDVSNG
LFRQDLYYRLNVIPIRLPSLAERKGDIRALALHFLSRTNQANQRNVNLAPDALARLEDHQ
WPGNIRELSNFIERVVLLADRPILHSEDVERFLPAAEPAPLFETPGSTLQQRVQIPEGVR
QYMANDSHSEDELRQALRLAGGNKSRAAQRLGLTTRQFSYRWQKICG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccagcatagtgaaagcgattcgccggcattctggagagagcaggagatgctc
cttctccaacaaataatgagcctcgtaggcaaagggctatcgccggacgtcattcttcgt
gaaacgctccatctgatgtccgaactcctcgggctgaaccgcgggcgcatcgtgcttctg
gacgatgccgcgactgacagttgcaggatccaatatgcgtatggcctcaagccggaagaa
atcgaacgggggcactacaaggtcggtgaaggcataacagggcatgtactgcgccatggc
cagttgacgatcgtgcaggacatcgatcgagacgatgtctttcttgcgcgggcggttaca
cgagaccgccttccgccggggcccgtgtcgtttatcgcgctccccatccgaattgaggat
cgaagcgtcggcgtcctggcatgccaccgaattcgtgtccgcaatcgcgcattatcgagc
gacgtgtctattttgcggatcttgtcgacactggccggccaccttcttcatcttgattcg
atgatgaaggcaaagactcgcgcactcgaagagcagaacgagatgttgatgcacgcgctt
gagcatgagagcgcgaagtacggaatcgtggggacttcgcccgcgctgcttaaagcgatc
tcggagctggagcgcgtctcggatgcatcggcgagtgtcttgctgctcggcgattcaggc
accggcaaggagctgttcgccagagcactgcacttgtcgggtcaacgccgtgataagccg
ttcataaaggtgaactgtgcagcaatccccgacacgcttttcgaatccgaattgtttggc
tacgagcggggcgcgtttacgggtgcgacgggtgtgcgagagggacttttcgaacaggcg
tcttcggggacgatcttccttgacgaaattggtgagctgcctctcacgttgcagggaaag
ctgcttcgcacattgcaggagggaacgataacccggctgggtgggaagcgtgaaatcaag
gtggacgtcagacttgtagcggcgacgaacagaagcctggaaacagatgtttcgaacggc
ctgttcagacaggatctctactaccgactcaacgttattcccattcgtcttccgtcgtta
gccgagcgcaaaggtgacattcgcgctttggcattgcattttctcagccgtacaaaccag
gcaaaccagcgcaacgtcaatcttgcgcccgatgcactcgcaaggctcgaggaccaccaa
tggcctggcaatatccgcgaactttcgaattttatcgaacgcgtcgtgctgctcgccgac
aggccaatactccattcggaagatgttgaacggtttctacccgcagcggaaccggcgcca
ctgtttgagactcccggttcgaccctgcagcagagggttcaaattccggaaggggtgcgt
cagtacatggcgaacgactcacattcggaagatgaactgcgtcaggcattgcgcttggct
ggcggcaacaagtcgcgcgcagcgcaacgcctcgggttgacgacgcgtcagttctcgtat
cgctggcagaaaatctgcggctag
DBGET
integrated database retrieval system
