Pandoraea sp. XY-2: DRB87_07945
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Entry
DRB87_07945 CDS
T06086
Name
(GenBank) 3-isopropylmalate dehydratase
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00290
Valine, leucine and isoleucine biosynthesis
pand00660
C5-Branched dibasic acid metabolism
pand01100
Metabolic pathways
pand01110
Biosynthesis of secondary metabolites
pand01210
2-Oxocarboxylic acid metabolism
pand01230
Biosynthesis of amino acids
Module
pand_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
DRB87_07945
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
DRB87_07945
Enzymes [BR:
pand01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
DRB87_07945
4.2.1.35 (R)-2-methylmalate dehydratase
DRB87_07945
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Motif
Pfam:
Aconitase
Aconitase_C
DUF4127
Motif
Other DBs
NCBI-ProteinID:
QBC31306
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Position
1738375..1740393
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AA seq
672 aa
AA seq
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MQATVQLHGRVLWLSDRAEAMARQLAGESLTRTEAGPLRDQISTDEMTPAWACLAFDETL
GDYVYVGLRCSADATNPAGVFPVRQKAVREGGFALSVAGMRRGKGSSREASPFAEWCAGI
RIVIAESFERIYAQNCQNLGLLMSTDLALAERLQAGETVAIDAFLEDCDPLGEEIVRSGG
LFGYTRRRLAGDVVAPRPAHAPGPMTYGEKIIARALGVPRVRAGDAVFVPADWRFSHEYV
TPMAVSFLRHAFGDAVPALHDPASMLCFEDHLTHLDTVSVGSGRPPPLVDAAQRLGSVQR
EFCAQHDLRLHGRAAGGGSEGICHALMLERYALPGQVIVGTDSHTPHCGAVGAFAFGVGA
TEMANAWLTGDARLAVPGTCLVHLRSRLPAGVGAKDLALHLLHLPYIRDGRAIGQIIEFS
GEAVAHLSTDERATLTNMVAEIGGLTGLIVPDAETLRYLRERRGVDVALAPWMTSDAQAA
YAHVIEIDCARLGAMVASPGDPGNGVALTQLSAEVPIDIAYGGSCTGSKREDLRACHEVL
AWGLSQGHKVADGVRFYLQYGSEDVRAWCEAQGYSDVFAAAGVKVLSPGCGACVNAGPGV
SRAPDEVVISAQNRNFPGRSGPGQMWLGSPATVAASALAGYIVGFDQLRRNGFAAHAARL
PDRRRGDALRAG
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccactgtgcaactccacggacgtgtgctgtggttgagcgaccgggctgaggcc
atggcccggcaactggcgggcgaatcgttgacgcgcaccgaagccggaccgttgcgcgac
cagatatccaccgacgagatgacgcccgcatgggcgtgtctggcgttcgatgagacgctc
ggcgactacgtctatgtcggattgcgatgcagtgcagacgcaacgaatccggccggcgtg
tttcccgttaggcagaaggcggtgcgcgaaggcggcttcgcgttgtcggtcgccggcatg
cgccgtggcaaggggtcgtcgcgcgaggccagtccgttcgccgaatggtgcgcgggcatc
cggatcgtaatcgccgagagtttcgagcgcatttatgcgcagaactgccagaacctcggg
ctgctgatgtcgactgacttggcgctcgcggagcggctgcaagcgggggagacggtcgcc
atcgacgcctttctcgaagactgcgatccattgggcgaggagatcgtgcgcagcggggga
ttgttcggttatacacggcgccggctggcgggagacgtcgtggcgccgcggcccgcccat
gcgccgggaccgatgacctacggcgagaagatcattgccagggcgctcggcgtgcctcgt
gtgcgcgcaggcgacgccgtgttcgtccccgccgactggcgtttttcccacgaatacgtg
acgccgatggccgtgagcttcctgcgtcacgccttcggcgacgcggtgccggcgctgcat
gacccggcgtcgatgctgtgctttgaggatcacctgacccatctcgacacggtgtccgtc
ggcagtggcaggccgccgccgctggtggatgcggcgcagcgtctgggttcggtccagcgc
gagttctgcgcgcagcatgatctgcgtctgcatggacgcgcggcgggcggtggctcggaa
ggcatctgccatgccttgatgctcgagcgctacgcgctgccggggcaggtcatcgttggc
accgattcgcatacgccgcattgcggcgcggtcggtgcgtttgcgttcggcgtgggcgcc
acggagatggcgaacgcctggttgacgggcgacgcgcgactggcggtgccgggcacctgt
ctcgtgcatctgcgctcgcgcttgccggcgggcgtgggggcgaaggatctcgcgctgcac
ttgctgcatctcccgtacatccgcgacggccgtgccatcggtcagatcatcgaattttcc
ggcgaggcggtggcccacctgtcgaccgacgagcgggcgacgctgaccaacatggtggcg
gaaatcggtggactgaccgggctcatcgtgcccgatgccgagaccttgagatacctgcgt
gaacggcgcggcgtcgacgttgcgttggcgccgtggatgacaagcgatgcgcaggccgct
tacgcccacgtcatcgagatcgattgcgcccggctcggcgcgatggtggcgagtcccggc
gatccgggcaacggcgtggcgctcacccagttgtcggcggaggtgccgatcgatatcgcg
tacgggggatcgtgtacgggcagcaagcgtgaggacctgcgcgcatgccacgaagtgctc
gcatggggcctgtcgcaagggcacaaggtcgccgatggtgtgcgcttctacctgcagtac
ggcagcgaagatgtccgtgcgtggtgcgaggcacagggctactcggacgtgttcgcggcg
gccggcgtcaaggtgctctcgccggggtgtggcgcgtgtgtgaacgctggcccgggcgtg
tcgcgtgcacccgacgaggtggtcatcagcgcgcagaaccgaaatttcccgggtcgttcg
ggacccgggcagatgtggctgggcagtccggccaccgtggccgcgagtgccttggcgggg
tacatcgtcggcttcgatcaattacgacgcaacggcttcgcggcgcatgccgcgcgcctg
ccggatcggcggcgtggcgacgcgttgcgcgcgggttga
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