Pandoraea sp. XY-2: DRB87_08265
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Entry
DRB87_08265 CDS
T06086
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DRB87_08265 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pand01007
]
DRB87_08265 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pand03016
]
DRB87_08265 (lysS)
Enzymes [BR:
pand01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DRB87_08265 (lysS)
Amino acid related enzymes [BR:
pand01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DRB87_08265 (lysS)
Transfer RNA biogenesis [BR:
pand03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DRB87_08265 (lysS)
Prokaryotic type
Other AARSs
DRB87_08265 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QBC31350
LinkDB
All DBs
Position
complement(1804257..1805801)
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AA seq
514 aa
AA seq
DB search
MTDHNTPAHTGTPAGDLPHDDNKLIAERREKLQALRANGVAFPNDFRPEQHAGDLQARYQ
DVDNEVLEAEPVPVSVAGRMMLKRVMGKAAFATVQDGSGQIQFFIGRDDVGADAMTAFKG
WDIGDIVAATGTLFRTRTGELSVKVKALRLLAKALRPLPDKFHGLSDQETKYRQRYVDLI
TSPETRSTFRARAKAIASMRKYMTDADFMEVETPMLHPIPGGAAAKPFITHHNALDMQMY
LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTE
ALIRNAALDARGTATIEYQGRELDLSKPFHRLTIVEAIRKYAPEYTEAQLADIEFVRGAL
GKYGVKVDAPQFKNAGLGALQLALFEETAESQLWEPTFIVDYPVEVSPLARESDTVPGIT
ERFELFITGREIANGFSELNDPEDQAARFRAQVEQKDAGDEEAMYYDADYIRALEYGMPP
TGGCGIGIDRLIMLLTDSPNIRDVLLFPHLRRED
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcacaatactccggcccatacgggcaccccggcgggcgacctgccgcacgac
gacaacaagctcatcgcggagcgtcgcgagaagctgcaggcgctgcgtgccaacggcgtg
gcgttcccgaacgacttccgtcccgaacagcacgccggcgacctgcaggcgcgctatcag
gacgtggacaacgaggtgctcgaagccgagcccgtccccgtgtcggtggccggtcgcatg
atgctcaagcgcgtgatgggcaaggccgccttcgccaccgtgcaggacggcagcggtcaa
atccagttcttcatcggccgcgacgacgtcggcgccgatgccatgaccgccttcaagggc
tgggacatcggcgatatcgtcgccgctaccggcacgctgttccgtacgcgcaccggcgaa
ctgtcggtcaaggtgaaggcactgcggctgctcgccaaggcgctgcgcccgctgccggac
aagttccacggcctgtcggatcaggagacgaagtaccgtcagcgctacgtcgacctgatt
acctcgcccgaaacgcgcagcacgttccgcgcccgcgcgaaggccatcgcctcgatgcgc
aagtacatgacggacgccgacttcatggaagtcgaaacgccgatgctgcacccgattccg
ggcggcgccgcggccaagccgttcatcacgcaccacaacgcgctcgacatgcagatgtat
ctgcgtatcgcgccggagctgtatctgaagcgcctgatcgtcggcggcttcgagcgtgtg
ttcgagatcaaccgtaacttccgcaatgaaggcgtgtcaccgcgccacaacccggaattc
acgatgatggagttctacgcggcctacacggactaccgttggctgatggacttcaccgaa
gcgctgatccgcaacgccgcactcgacgcgcgcggcaccgcaaccatcgaataccagggc
cgcgaactggatttgtcaaagccgttccaccgcctgacgatcgtcgaagcgattcgcaaa
tacgcgcccgagtacaccgaagcgcaactggccgacatcgaattcgtgcgtggcgcgctg
ggcaagtatggcgtgaaggtcgatgcgccgcagttcaagaacgcgggcctcggtgcgctg
caactggccctgttcgaagagacggccgagagccagttgtgggagccgactttcatcgtc
gactatccggtggaagtctcgccgctcgcgcgcgagtccgataccgtgccgggcatcacc
gagcgcttcgaactgttcatcacgggccgcgagatcgccaacggcttctccgagttgaac
gacccggaagatcaggcagcacgctttcgtgcgcaagtcgagcagaaggacgcgggcgac
gaagaggccatgtattacgacgccgattacattcgcgcgctcgaatacggcatgcccccg
acgggcggctgcggcatcggcatcgaccgtctgatcatgctgctcaccgacagcccgaac
attcgcgatgtgctgctcttcccgcacctgcgccgcgaagactga
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