Pandoraea sp. XY-2: DRB87_08280
Help
Entry
DRB87_08280 CDS
T06086
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand03410
Base excision repair
pand03430
Mismatch repair
pand03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DRB87_08280 (recJ)
03430 Mismatch repair
DRB87_08280 (recJ)
03440 Homologous recombination
DRB87_08280 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pand03400
]
DRB87_08280 (recJ)
DNA repair and recombination proteins [BR:
pand03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DRB87_08280 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DRB87_08280 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DRB87_08280 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
T3SS_ExsE
Motif
Other DBs
NCBI-ProteinID:
QBC31353
LinkDB
All DBs
Position
complement(1807577..1809274)
Genome browser
AA seq
565 aa
AA seq
DB search
MTDIVTRHVDDATANALARDGVHPVLARLFASRGVAETAETETALARLIPPTQLKGAQEA
AAFLADAMAAGKRMLVVADYDCDGATACAVAVRGLRMFGAKVEYLVPNRFEYGYGLTPEI
VALAAQGKAGPPDVLITVDNGIASLEGVAAAQALGIEVVVTDHHLPGNELPNARCIVNPN
QPGCAFPSKHLAGVGVMFYVLLALRAELRARGAFEAREQPRLDTLLDLVALGTVADVVKL
DANNRILVAQGLSRMRAGRMHPGINALFRAAARNARQAGSFDLGFGLGPRLNAAGRLADM
SLGIECLLTDDDARAWTLAQELDAMNRERREIEAGMQQEALADLARFDPRAATTLCAFNE
TWHQGVIGIVAARLKEKFYRPTIVFAPGDDGQIKGSGRSIPGFHLRDALDLVTKREPGLI
GKFGGHAMAAGLTIAADALPRFQSAFEAVGQAWLDETALSRVIETDGDIGDECFVPPFVA
LLDAQVWGQGFPPPVFSGEFDVLSQAILKDKHLKLQLGRGRMRFNAIWFNHADTLPSRAR
FAYRLAADTFNGVSRVQMIVEHAQG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatcgtcacccgtcatgtcgacgacgcgacggccaacgccctcgcgcgcgac
ggcgtccacccggtgcttgcccgcctgttcgcatcgcgcggcgtggccgagaccgccgag
accgaaacggcgctggcccgtttgatccccccgacccagctcaagggcgcgcaagaggcg
gccgccttcctcgccgacgccatggccgccggcaagcgcatgctcgtggtggccgactac
gattgcgacggtgcgaccgcctgcgccgtggccgtgcgcggcttgcgcatgttcggtgcg
aaggtcgagtacctggtgccgaaccggttcgaatacggctatggcctgacgcccgaaatc
gtggctctggccgcgcaaggcaaggcggggccgccggacgtgctgatcaccgtcgacaac
ggcatcgccagcctcgagggcgtggccgccgcgcaggcgctcggcatcgaagtcgtggtg
accgatcaccatctgccgggcaacgaattgcccaacgcgcgttgcatcgtcaatcccaac
cagccgggctgcgcattcccgagcaagcacctggccggtgtcggcgtgatgttctacgtt
ctgctcgcgctgcgcgccgagttgcgcgcgcgcggggcgttcgaggcgcgcgaacagccg
cggctcgatacgttgctcgacctggtcgcactgggcacggtcgcggacgtggtcaagctc
gacgccaacaaccgcatcctcgtggcgcaaggcctctcgcgcatgcgcgcagggcgcatg
catcccgggatcaacgcgctctttcgcgcggccgcccgcaatgcgcgccaggcgggcagt
ttcgatctgggcttcggcctcgggccgcgtctgaacgccgcagggcgccttgccgacatg
tcgctcggcatcgaatgcctgctgacggacgacgacgctcgcgcctggacgctcgcgcag
gaactcgacgcgatgaatcgcgagcgccgtgagatcgaagcagggatgcagcaggaagcc
ctggccgatctggcgcgcttcgaccctcgcgccgccaccacgctgtgcgcgttcaacgag
acctggcaccagggcgtaatcgggatcgtcgccgcacggctaaaagaaaagttctaccgt
ccgaccatcgtgttcgccccgggcgacgacggccagatcaaggggtccggccgctcgatc
cccggctttcacttgcgcgacgcgctcgatctcgtcaccaagcgcgaaccgggtctcatc
ggcaagttcggcggtcacgcgatggccgcaggcctcacgatcgctgccgacgccctgccg
cgcttccagtcggcattcgaagccgtgggacaggcgtggctcgacgagacggcgctctca
cgcgtgatcgagaccgacggcgacatcggcgacgagtgcttcgtgccgccctttgtcgcc
ctgctcgacgcacaagtgtggggacagggtttcccgccgcccgtgttctcgggcgagttc
gatgtgctctcccaagccatcctcaaggacaagcacctgaagttgcaactcggtcgcggg
cgcatgcgcttcaacgccatctggttcaatcacgccgataccttgccgagccgtgcgcga
tttgcctatcggttggccgccgacaccttcaacggcgtctcgcgcgtgcagatgatcgtc
gaacacgcccagggctga
DBGET
integrated database retrieval system
