Pandoraea sp. XY-2: DRB87_08670
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Entry
DRB87_08670 CDS
T06086
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00020
Citrate cycle (TCA cycle)
pand00190
Oxidative phosphorylation
pand00650
Butanoate metabolism
pand00720
Other carbon fixation pathways
pand01100
Metabolic pathways
pand01110
Biosynthesis of secondary metabolites
pand01120
Microbial metabolism in diverse environments
pand01200
Carbon metabolism
Module
pand_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pand_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pand_M00149
Succinate dehydrogenase, prokaryotes
pand_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DRB87_08670
00650 Butanoate metabolism
DRB87_08670
09102 Energy metabolism
00190 Oxidative phosphorylation
DRB87_08670
00720 Other carbon fixation pathways
DRB87_08670
Enzymes [BR:
pand01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DRB87_08670
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
Pyr_redox_3
FAD_oxidored
NAD_binding_8
NAD_binding_7
Lycopene_cycl
ThiF
Motif
Other DBs
NCBI-ProteinID:
QBC31419
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Position
1888471..1890246
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AA seq
591 aa
AA seq
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MAAIKNSLPRRRFDVVIVGAGGSGMRASLQLAKAGLSVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCRQAPNAVYELEHFGMPFDRNADGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHALLHTLYQQNVAAKTHFFVEWMALDLIRNEDG
DVLGVSALELETGEVYLLEAKCTLFATGGAGRVYAASTNAFINTGDGLGMAARAGIPLED
MEFWQFHPTGVAGAGVLITEGVRGEGGILRNSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNGDYVLLDLSHIGAETIMKRLPSIREIALKFANVDAIKEPIPVVPTIHYQ
MGGIPTNYNGQVVVQQNGESTPVNGFYAVGECSCVSVHGANRLGTNSLLDLVVFGRAAGN
HIVDFVKNHGEHKPLPADAGDNAMARLGRLEASSTGEYAQDIANDIRATMQKHAGVFRTS
DLLKEGVDEIKQVAERVSHVHLKDKSKVFNTARMEALEVDNLIEVAKATMIAAEARKESR
GAHAHSDYPERDDANWMRHSLFFSEGNRLDYKPVQLKPLTVDSVPPKARTF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaattaaaaattcgctgccgcgtcgccgctttgacgttgtcatcgtgggcgca
ggtggttcgggcatgcgcgcgtcgctgcaactggccaaggccggtctgtcggtcgccgtg
ctgtccaaggtgttccccacccgttcgcataccgtggccgctcagggcggcattggcgcc
tcgctcggcaacatgagcgaagacaactggcactaccacttctacgacaccatcaagggc
tccgactggctcggcgaccaggatgcgatcgagttcatgtgccgtcaggcgccgaacgcc
gtctacgaactggaacacttcggcatgccgttcgaccgtaacgcggacggcacgatctac
cagcgtccgttcggcggtcacacggccaattacggcgagaagccggtccagcgcgcttgc
gcggccgccgaccgtaccggtcacgccctgctgcacacgctgtatcaacagaacgtggcg
gccaagacccacttcttcgtggagtggatggcgctcgacctgattcgcaacgaagacggt
gatgtgctgggcgtgtcggcgctcgagctcgaaaccggcgaagtctacctgcttgaagcc
aagtgcacgctgttcgccaccggcggtgccggccgtgtgtatgccgcctcaaccaacgcg
ttcatcaacaccggcgacggtcttggcatggccgcgcgtgcgggcattccgctcgaagac
atggaattctggcaattccacccgaccggcgtggccggcgcgggcgtgctgattaccgaa
ggtgttcgcggtgagggcggtattctgcgcaactcgaacggcgagcgcttcatggagcgc
tatgccccgacgctgaaggatctggcgccgcgtgacttcgtgtcgcgttcgatggaccag
gaaatcaaggaaggccgtggctgcggcccgaatggcgactacgtgctgctcgacctctcg
cacatcggtgccgagacgatcatgaagcgcctgccgtcgattcgcgaaatcgccctgaag
ttcgccaacgtcgacgcgatcaaggaaccgatccccgtcgtgccgaccatccactaccag
atgggtggcattccgacgaactacaacggccaggttgtcgtgcagcagaacggcgaatcg
accccggtcaacggcttctacgccgtgggcgagtgctcctgcgtgtcggtccacggtgcc
aaccgtctgggcacgaactcgctgctcgacctcgtggtgttcggccgtgcggccggcaac
cacatcgtcgacttcgtgaagaaccacggcgagcacaagccgctgcccgccgatgccggc
gacaacgccatggcgcgtctgggtcgtctggaagcctccagcacgggcgagtacgcacag
gacatcgccaacgacatccgcgcgacgatgcagaagcatgccggcgtgttccgtacgtcc
gacctgctcaaggaaggcgtggacgagatcaagcaagtggccgagcgcgtgtcgcacgtt
cacctgaaggacaagtcgaaggtgttcaacacggcgcgcatggaagcgctggaagtggac
aacctgatcgaagtggccaaggccaccatgatcgcagccgaagcccgcaaggaaagccgt
ggcgcgcacgcgcacagcgattatccggagcgcgacgacgccaactggatgcgccactcg
ctgttcttcagcgaaggcaaccgtctggattacaagccggtgcagttgaagccgctgacc
gtcgactcggttccgcccaaggcgcggacgttctaa
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