Pandoraea sp. XY-2: DRB87_09100
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Entry
DRB87_09100 CDS
T06086
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
pand
Pandoraea sp. XY-2
Pathway
pand02024
Quorum sensing
pand03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DRB87_09100
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DRB87_09100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pand03019
]
DRB87_09100
03036 Chromosome and associated proteins [BR:
pand03036
]
DRB87_09100
Messenger RNA biogenesis [BR:
pand03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DRB87_09100
Chromosome and associated proteins [BR:
pand03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
DRB87_09100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QBC31486
LinkDB
All DBs
Position
1984692..1984928
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AA seq
78 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPEAEQS
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaacttctacaagacccgtttctgaacgccttgcgtaaggagcat
gttcccgtctcgatctatctggtcaacggtatcaagctgcagggaaacatcgagtcgttt
gaccagtatgtcgtcctgctgcgcaacacggtcacccaaatggtttataagcatgccatt
tcgacggtcgtgcctgcgcgtccggtgaatttccatccggaagccgagcagtcctga
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