Pandoraea sp. XY-2: DRB87_09535
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Entry
DRB87_09535 CDS
T06086
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pand
Pandoraea sp. XY-2
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pand03009
]
DRB87_09535
Enzymes [BR:
pand01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
DRB87_09535
Ribosome biogenesis [BR:
pand03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DRB87_09535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QBC31555
LinkDB
All DBs
Position
complement(2075587..2076306)
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AA seq
239 aa
AA seq
DB search
MELDRLLQSQGFGSRKMCRKLIVTGAFAIDGVVHDNPRESLDPQGLQFTLDGEPWEYREH
VYVLLNKPQGYECSTSPTHHEGVHSLLPLPMAVRGVQPAGRLDQDTTGMLLLSDDGAFLH
AMMSPRRHVPKRYVATTKHPVTDDMLQALRDGVLLRDETEPLAATDVMRASSHEIAMTIT
QGKYHQVKRMVAAAGNRVEGLVRIAIGGLPMGNLALGEWRYLSPDELLSLPYEVPASGK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atcgagctcgatcgtttactgcaatcgcagggcttcggcagtcgcaagatgtgccgcaaa
ctcattgtcaccggtgcatttgccatcgacggcgtggtgcacgacaatccgcgcgagtcg
ttggacccgcaaggcctgcaattcacgctcgacggcgagccctgggaatatcgcgaacac
gtctacgtgctgctcaacaagccgcaaggctacgagtgctccacgagcccgacgcatcac
gagggtgtgcattcgctactcccgttgccgatggccgtgcgtggcgtgcaaccggccggt
cgcctcgaccaggatacgaccggcatgctgctgctctccgacgacggtgcgttcctgcat
gccatgatgtcaccgcgtcgccacgtgcccaagcggtatgtggccacgaccaagcatccg
gtcaccgacgacatgctgcaggccttgcgcgacggcgtattgctgcgcgacgaaacggag
cctctcgccgcaacggacgtcatgcgtgcctcgtctcacgagattgccatgacgatcaca
caaggcaaataccatcaggtcaaacggatggtcgccgccgcaggcaatcgggtggaaggg
ctggtcagaatcgcgatcggcggtctgccgatgggcaatctcgcactgggcgaatggcgc
tatctctcgccggacgaactgctgtcgctaccgtacgaagtgcccgcctccggcaaatga
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