Pandoraea sp. XY-2: DRB87_10070
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Entry
DRB87_10070 CDS
T06086
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pand
Pandoraea sp. XY-2
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pand03400
]
DRB87_10070
DNA repair and recombination proteins [BR:
pand03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DRB87_10070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
AAA_22
GvpD_P-loop
AAA_16
ChlI
AAA_24
Lon_C
RecA
nSTAND3
SLFN-g3_helicase
AAA_14
DUF7125
AAA
NTPase_1
B12-binding
NACHT
CobU
AAA_5
MCM
PAXNEB
AAA_28
Isochorismatase
DUF7129
AAA_19
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QBC31639
LinkDB
All DBs
Position
2192265..2193638
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AA seq
457 aa
AA seq
DB search
MAKAKTVYICTECGGQTPKWAGQCPHCNGWNSLVESVAEAPTGHRYQSLAKSTPVRKLAQ
IEAADVPRFSSGVSEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQSLAHLARERRALYV
SGEESGAQIALRAQRLGLGAAGEGGGELDLLAEIQLEKILGAIESEKPDVVVIDSIQTVY
SEALSSAPGSVAQVRECAAQLTRSAKQSGVTVIMVGHVTKEGSLAGPRVLEHIVDTVLYF
EGDTHSSYRLVRAFKNRFGAVNELGVFAMTEKGLRGVANPSALFLSQHEQSVPGSCVLVT
QEGTRPLLVEVQALVDTAQVPNPRRLAVGLEQNRLAMLLAVMHRHAGIACFDQDVFLNAV
GGVKISEPAADLAVLLAIHSSLRNKPLPRGIVAFGEVGLAGEIRPSPRGQDRLKEAAKLG
FSIAIIPKANAPKQPIDGLEVHAVDRLEHAISVVAGL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagccaagactgtctatatttgtaccgaatgcggcgggcagacgcccaagtgg
gctgggcagtgcccccactgcaacggctggaattcgctcgtcgaatcggtggcggaagcg
ccgacaggtcatcgataccaatcgctcgccaagagtacgccggtgcgcaagctcgcgcag
atcgaggcggccgatgtgccgcgcttctccagcggcgtgagtgaattcgaccgcgtgctg
ggcggcggtctggttgccggcggcgtggtgctcatcggcggggatcccgggatcggcaag
tcgacgctgctgctccagtcgcttgcgcatctggcgcgcgaacggcgcgcgctttacgtg
agcggcgaagaatcgggcgcgcagattgccttgcgtgcgcagcgcctgggcctcggcgcc
gcgggcgagggcggcggggaattggatttgttggcggaaatccagctcgagaagattctg
ggcgccatcgagtcggaaaagcccgacgttgtcgtgatcgactctatccagacggtctat
tccgaagcactcagttcggcgccgggatcggtcgcgcaggtgcgcgaatgcgcggcgcaa
ctcacgcgcagcgccaagcagagcggcgtaacggtgatcatggtcggccatgtgaccaag
gaaggcagtctcgccgggccgcgcgttctcgaacacatcgtcgacacggtgctgtatttc
gagggcgatacgcactcgtcgtaccggttggtgcgggcgttcaaaaatcggtttggtgcc
gtcaacgagttgggcgtgttcgcgatgacggagaaaggcctgcgcggcgtggcgaatccg
tcggccttgttcctctcgcaacatgagcaaagcgtgccgggctcgtgcgtgctcgtcacg
caggaaggcacgcgcccgctgctcgtcgaggtgcaggcgctggtcgacacggcgcaggtg
cccaatccgcggcgtttggccgtggggctggagcagaaccggctggcaatgttgctcgcc
gtgatgcatcgtcatgcgggcatcgcctgtttcgatcaggatgtgttcctgaacgctgtc
ggtggcgtgaagatttcggagccggcggccgatctggccgtgttgctggcgattcattcg
tcgctgcgcaacaagccgctgccgcgcggcatcgtggcattcggcgaggtcgggctggcg
ggcgaaatccggccgagcccgcgcggtcaggatcgtctcaaggaagccgccaaactgggc
ttttcgattgcgatcatcccgaaagcgaatgcgccgaagcaacccatcgacggcctcgaa
gtgcatgccgtcgaccgtttggagcacgcgatttccgtcgtggcggggttgtag
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