Pandoraea sp. XY-2: DRB87_10135
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Entry
DRB87_10135 CDS
T06086
Name
(GenBank) hypothetical protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
pand
Pandoraea sp. XY-2
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pand03009
]
DRB87_10135
Enzymes [BR:
pand01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
DRB87_10135
Ribosome biogenesis [BR:
pand03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DRB87_10135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QBC31650
LinkDB
All DBs
Position
complement(2211645..2213714)
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AA seq
689 aa
AA seq
DB search
MSDTPRTKLSAKHPRTLDKTRAPVRSSGALSRPTKAVPASMLDASGAKKKPAAKPARPRP
VDNAATPAGARRPAGSAAAPRKPAAGSTTPYEKRSTGERPPARGQRERVAGARPARLDDE
TRPRRAAEGGARGDFARPAKRGPDDRAPRRFDEDRPRRAAEGGARGDFARPAKRGPDDRA
PRRIDDDRPRRAAEGGARGDFARPAKRGPDDRAPRRFDEDRPRRAAEGGARGDFARPAKR
GPDDRAPRRIDDDRPRRAAEGGARGDFARPAKRGPDDRAPRRFDEDRPRRAAEGGARGDF
ARPAKRGPDDRAPRRFDEDLPRRAAEGGARGDFARPAKRGPDDRAPRRFDEDRPRRAAEG
GARGDFTRPAKRGPDDRAPRRFDEDRPRRAAEGGARGEGAPGGRFARDDRDTRTARPARP
ARVARDADDDIKIHHDAAGSLRLSKRMSELGLCSRREADEWIAKGWVRVDGKVVTELGTK
ILPTQEITVVQAAHKEQANRMTILLHKPVGYVSAQAEDGYEPAVVLVTREHHWAEDDAGV
RFSPSHLRSLAPAGRLDIDSTGLLVLTQDGRIAKQLIGEDSDIEKEYLVRVSYNEHVENV
QAHFPADRLALLRHGLELDDQPLKPAQVEWQNPEQLRFVLKEGKKRQIRRMCELVGLHVT
GLKRVRMGRITLGNLPVGEWRYLRAGEGF
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccccgcgcaccaaactgagcgccaaacatccccgcactctcgacaagact
cgcgctccggtgcgttcgtccggcgcgctgagccgtccgaccaaagccgtgcctgcgtcg
atgctcgacgccagcggcgcaaaaaagaagcctgccgcgaaaccggcacgaccgcgtccg
gtggacaatgcggctacgccggcgggtgcacgtcgcccggctggaagtgccgccgcgcca
cgcaaacctgcggccggcagcacaacgccgtacgaaaagcgttcgacgggcgaacgcccg
cccgcacgtggccaacgcgagcgcgttgctggcgcgcgtccggcacgacttgacgacgaa
acgcgtccgcgtcgcgctgccgaaggtggtgcacgtggcgatttcgcccgcccggccaaa
cggggacccgacgaccgcgccccgcgccgttttgacgaagaccgtccgcgtcgtgccgcc
gaaggcggtgcccgtggcgatttcgcccgcccggccaaacggggtcccgacgaccgcgcc
ccgcgccgtattgacgacgaccgtccgcgtcgcgctgccgaaggcggtgcccgtggcgat
ttcgcccgcccggccaaacggggacccgacgaccgcgccccgcgccgttttgacgaagac
cgtccgcgtcgtgccgccgaaggcggtgcccgtggcgatttcgcccgcccggccaaacgg
ggtcccgacgaccgcgccccgcgccgtattgacgacgaccgtccgcgtcgcgctgccgaa
ggcggtgcccgtggcgatttcgcccgcccggccaaacggggacccgacgaccgtgccccg
cgccgttttgacgaagaccgtccgcgtcgcgctgccgaaggcggtgcccgtggcgatttc
gcccgcccggccaaacggggacccgatgatcgtgcgccgcgccgttttgacgaagacctt
ccgcgtcgcgccgccgaaggtggcgcccgtggcgatttcgcccgcccggccaaacgaggt
cccgacgaccgtgccccgcgtcgttttgacgaagaccgtcctcgtcgtgccgccgaaggt
ggcgcccgtggcgatttcacccgcccggccaaacggggacccgacgaccgtgccccgcgc
cgttttgacgaagaccgtccgcgtcgcgctgccgaaggtggcgcccgtggcgaaggtgcg
cctggcggccgcttcgcccgcgacgatcgtgacacgcggaccgctcggccggcacgcccc
gcgcgcgtcgcgcgcgatgccgatgacgacatcaagatccatcacgacgccgctgggtcg
ctgcgcctgtccaagcgcatgtctgaactcggcctgtgttcgcgtcgcgaagccgacgag
tggatcgccaagggttgggttcgcgtcgacggcaaggtcgtgaccgaactcggcacgaag
atcctgccgacccaggaaatcaccgtcgtgcaggctgcgcacaaggagcaagccaatcgc
atgacgatcctgctgcacaagcccgtgggctacgtctccgcacaggcagaagacggctac
gagcccgctgtcgtgctggtcacgcgcgagcatcattgggccgaggacgatgccggcgtg
cgtttctcgccgtcgcatctacgcagtctcgcgcccgccggacgcctcgacatcgactcg
accggcctgctcgtcctgacgcaagacgggcgcattgccaagcaactgatcggggaagat
tcggatatcgagaaggagtacctcgtgcgcgtctcgtataacgagcatgtcgaaaacgtt
caggcgcatttcccggcagaccgtctggccctgctgcgtcacggcctggaactcgacgat
caaccgctcaaacccgcacaggtcgagtggcagaacccggagcaactgcgcttcgtgctc
aaggaaggcaagaaacgtcagatccgccggatgtgcgaactggtcggcctgcatgtgacc
ggcctcaagcgcgttcgcatgggacgcatcacgctgggcaacctgcccgttggtgagtgg
cgctacctgcgcgccggtgaaggcttctga
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